Arbi Marwa, Harigua-Souiai Emna, Hanachi Mariem, Larbi Imen, Chaouch Melek, Rjaibi Dorra, Diouani Mohamed Fethi, Benkahla Alia, Souiai Oussema
Laboratory of Bioinformatics, Biomathematics and Biostatistics, LR16IPT09, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.
Laboratory of Molecular Epidemiology and Experimental Pathology-LR16IPT04, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.
Front Vet Sci. 2025 Jul 29;12:1569244. doi: 10.3389/fvets.2025.1569244. eCollection 2025.
Epizootic Hemorrhagic Disease Virus (EHDV) is an arbovirus, transmitted to wild and domestic ruminants through Culicoides biting midges. Since 2006, high morbidity and mortality cases of EHDV have been reported among cattle and deer populations in several Mediterranean countries. The temporal and geographic origins of these incursions remained unclear. In this study, we aimed to investigate the evolutionary history of EHDV in the Mediterranean region and highlight the epidemiological features of viruses in relationship with genetic diversity and viral ecology.
We extracted from GenBank the EHDV VP2 and VP5 segments isolated in the mediterranean region during the period 2006 to 2023 and blasted them to obtain a final dataset of 68 and 91 nucleotide sequences. Using these datasets, we conducted a Bayesian phylodynamic analysis, which inferred discrete models of "geographic origin," "Serotype" and "Host" by employing the BEAST package.
RSPP and TMRCA analyses showed that the Mediterranean EHDV has as ancestral root the North America strains that circulated in the 17 century. Our study suggested that the first EHDV incursions in the Mediterranean region started in France and Tunisia during the 1800s. The latter countries were epicenters of EHDV in the region. Significant transition routes (BF>3) were detected revealing virus transmission between North African and European countries. Serotype model study revealed VP5 multiple inter-serotype events involving serotypes 1, 2, 6, 7, and 8 with high statistical support (BF>100). Significant virus transmission was detected for Cattle-deer and Culicoides-Cattle transition routes.
The virus transmission was intense between North African and European countries of the Mediterranean region. EHDV spread in this region seems to be influenced mainly by vector/host distribution and abundance, ruminants' trade and prevailing winds.
流行性出血病病毒(EHDV)是一种虫媒病毒,通过库蠓叮咬传播给野生和家养反刍动物。自2006年以来,在地中海的几个国家,牛和鹿群中报告了高发病率和高死亡率的EHDV病例。这些疫情的时间和地理起源仍不清楚。在本研究中,我们旨在调查地中海地区EHDV的进化史,并突出病毒的流行病学特征与遗传多样性和病毒生态学之间的关系。
我们从GenBank中提取了2006年至2023年在地中海地区分离的EHDV VP2和VP5片段,并进行比对以获得最终包含68个和91个核苷酸序列的数据集。利用这些数据集,我们进行了贝叶斯系统发育动力学分析,通过使用BEAST软件包推断“地理起源”、“血清型”和“宿主”的离散模型。
RSPP和TMRCA分析表明,地中海EHDV的祖先根源是17世纪流行的北美毒株。我们的研究表明,地中海地区首次出现EHDV疫情始于19世纪的法国和突尼斯。后两个国家是该地区EHDV的中心。检测到显著的传播路径(BF>3),揭示了北非和欧洲国家之间的病毒传播。血清型模型研究显示,VP5存在涉及血清型1、2、6、7和8的多个血清型间事件,具有较高的统计支持度(BF>100)。在牛-鹿和库蠓-牛的传播路径上检测到显著的病毒传播。
地中海地区的北非和欧洲国家之间病毒传播频繁。EHDV在该地区的传播似乎主要受媒介/宿主分布和数量、反刍动物贸易和盛行风的影响。