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用于多靶点治疗药物高效研发与转化的系统生物学平台。

Systems biology platform for efficient development and translation of multitargeted therapeutics.

作者信息

Azer Karim, Leaf Irina

机构信息

Axcella Therapeutics, Cambridge, MA, United States.

出版信息

Front Syst Biol. 2023 Sep 18;3:1229532. doi: 10.3389/fsysb.2023.1229532. eCollection 2023.

Abstract

Failure to achieve efficacy is among the top, if not the most common reason for clinical trial failures. While there may be many underlying contributors to these failures, selecting the right mechanistic hypothesis, the right dose, or the right patient population are the main culprits. Systems biology is an inter-disciplinary field at the intersection of biology and mathematics that has the growing potential to increase probability of success in clinical trials, delivering a data-driven matching of the right mechanism to the right patient, at the right dose. Moreover, as part of successful selection of targets for a therapeutic area, systems biology is a prime approach to development of combination therapies to combating complex diseases, where single targets have failed to achieve sufficient efficacy in the clinic. Systems biology approaches have become increasingly powerful with the progress in molecular and computational methods and represent a novel innovative tool to tackle the complex mechanisms of human disease biology, linking it to clinical phenotypes and optimizing multiple steps of drug discovery and development. With increasing ability of probing biology at a cellular and organ level with omics technologies, systems biology is here to stay and is positioned to be one of the key pillars of drug discovery and development, predicting and advancing the best therapies that can be combined together for an optimal pharmacological effect in the clinic. Here we describe a systems biology platform with a stepwise approach that starts with characterization of the key pathways contributing to the Mechanism of Disease (MOD) and is followed by identification, design, optimization, and translation into the clinic of the best therapies that are able to reverse disease-related pathological mechanisms through one or multiple Mechanisms of Action (MOA).

摘要

未能达到疗效即使不是临床试验失败最常见的原因,也是最主要的原因之一。虽然这些失败可能有许多潜在因素,但选择正确的机制假设、正确的剂量或正确的患者群体是主要原因。系统生物学是生物学和数学交叉的跨学科领域,越来越有潜力提高临床试验成功的概率,以数据驱动的方式在正确的剂量下将正确的机制与正确的患者相匹配。此外,作为成功选择治疗领域靶点的一部分,系统生物学是开发联合疗法以对抗复杂疾病的主要方法,在这些疾病中单一靶点在临床上未能达到足够的疗效。随着分子和计算方法的进步,系统生物学方法变得越来越强大,它代表了一种新颖的创新工具,用于解决人类疾病生物学的复杂机制,将其与临床表型联系起来,并优化药物发现和开发的多个步骤。随着组学技术在细胞和器官水平探测生物学的能力不断提高,系统生物学将持续存在,并有望成为药物发现和开发的关键支柱之一,预测并推进能够联合起来在临床上产生最佳药理作用的最佳疗法。在此,我们描述了一个系统生物学平台,采用逐步推进的方法,首先对导致疾病机制(MOD)的关键途径进行表征,然后识别、设计、优化能够通过一种或多种作用机制(MOA)逆转疾病相关病理机制的最佳疗法,并将其转化应用于临床。

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