全球小麦叶际真菌群落的分类多样性——一项荟萃分析

Taxonomic diversity in the global wheat phyllosphere mycobiome - a meta analysis.

作者信息

Fischer Marie Højmark, Rzepczynska Agnieszka, Kjøller Rasmus

机构信息

Section of Terrestrial Ecology, Institute of Science, Department of Biology, Copenhagen University, Copenhagen, Denmark.

Section of Microbial Ecology, Department of Biology, Lund University, Lund, Sweden.

出版信息

Front Plant Sci. 2025 Jul 30;16:1597807. doi: 10.3389/fpls.2025.1597807. eCollection 2025.

Abstract

Wheat () is a major crop grown on all continents. Due to environmental concerns, it is desirable to reduce the inputs of both chemical pesticides and inorganic fertilizers. However, yield reduction must be expected when switching to low-input systems. To mitigate such losses, the use of natural or introduced microbiomes may provide the key to maintaining sustainable yield. Phyllosphere fungi, both endophytic and phylloplane-associated, colonize aboveground plant structures, some of which have the potential to mitigate biotic and abiotic stressors. A first step toward realizing the potential of the wheat microbiome is to map the current knowledge on wheat phyllosphere fungi. This meta-analysis aims to map the diversity and abundance of fungal taxa associated with the wheat phyllosphere across global wheat-producing areas. To this end, we searched previous published literature and retrieved fungal community data from relevant studies. Retrieved studies included both culturing-based and metabarcoding amplicon sequence-based studies. We retrieved and analyzed 33 studies from five regions across the world, which differed greatly in their taxonomic composition. Across all regions, we found that while the majority of identified genera were unique to individual studies, some genera occurred across all five wheat growing regions, specifically and Furthermore, we identified that while community composition differed between wheat growing regions, the identification method used was the most significant factor determining the depiction of community composition. We also highlight a lack of research in important wheat growing regions that are important for global wheat production. These considerations and other knowledge gaps are used to pinpoint future research.

摘要

小麦()是一种在各大洲都有种植的主要作物。出于环境方面的考虑,减少化学农药和无机肥料的投入是很有必要的。然而,转向低投入系统时产量必然会降低。为了减轻这种损失,使用天然或引入的微生物群落可能是维持可持续产量的关键。叶际真菌,包括内生真菌和叶表面相关真菌,定殖于地上植物结构,其中一些有减轻生物和非生物胁迫的潜力。实现小麦微生物群落潜力的第一步是梳理当前关于小麦叶际真菌的知识。这项荟萃分析旨在梳理全球小麦产区与小麦叶际相关的真菌类群的多样性和丰度。为此,我们检索了先前发表的文献,并从相关研究中获取真菌群落数据。检索到的研究包括基于培养的研究和基于元条形码扩增子序列的研究。我们从全球五个地区检索并分析了33项研究,这些研究在分类组成上差异很大。在所有地区,我们发现虽然大多数已鉴定的属是个别研究特有的,但有些属在所有五个小麦种植区都有出现,特别是 和 此外,我们还发现,虽然小麦种植区之间的群落组成不同,但所使用的鉴定方法是决定群落组成描述的最重要因素。我们还强调,对于全球小麦生产至关重要的重要小麦种植区缺乏研究。这些考虑因素和其他知识空白被用于确定未来的研究方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aff5/12343630/dd4ad716744b/fpls-16-1597807-g001.jpg

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