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对腐朽木材的重复测量揭示了真菌木材内生菌的成功与影响。

Repeated measures of decaying wood reveal the success and influence of fungal wood endophytes.

作者信息

Zhang Yanmei, Peng Zhuobing, Song Zewei, Schilling Jonathan S

机构信息

Department of Plant and Microbial Biology, University of Minnesota, Saint Paul, Minnesota, USA.

Section of Food Microbiology, Gut Health, and Fermentation, Department of Food Science, University of Copenhagen, Frederiksberg, Denmark.

出版信息

mSystems. 2025 Aug 15:e0038225. doi: 10.1128/msystems.00382-25.

Abstract

Predicting wood decomposition is challenging due to complex successional dynamics among decomposers that colonize and defend wood territory. This starts with saprotrophic fungi that reside latently in healthy wood until trees senesce, but these "endophytes" are rarely considered an endogenous wood trait that might improve predictions for decomposition rates or fates. Here, we used repeated measures to track the decomposition of paper birch () and red pine (), assessing wood properties and microbial succession over 5 years in a northern forest (Minnesota, USA). We compared fungi and bacteria present in sound wood (endophytes) versus those arriving as external colonizers, and we used relevant treatments to vary accessibility for colonizers (ground contact versus aboveground; bark off versus bark on). Over 5 years, accessibility treatments had a significant effect on decay rates and fungal community succession. Wood rot type was unanimously white rot (lignin-degrading fungi), but fungal dominance was treatment-specific. Most dominant fungi could be traced to operational taxonomic units (OTUs) present as endophytes in sound wood, suggesting that treatments affected endophyte competition more than external colonizer success, even in ground contact. Although fungal communities lost diversity (Shannon index) as certain taxa became dominant, bacterial communities converged irrespective of treatment, without notable co-occurrence with fungi and without losing diversity, suggesting a decoupled dynamic. The results imply a strategic benefit for saprotrophic fungi to colonize trees as endophytes, and they support including fungal endophytes along with predictors of their competitive success as "plant" traits to improve predictive models.IMPORTANCEEstablishing this persistence and influence for endophytic saprotrophs has not been possible without repeated measures in a long-term study. We believe our findings are significant for two key reasons. First, they link community succession to a "trait" in wood that may be more predictable-governed by the living tree as the "gate-keeper"-compared with predicting assembly history for external colonizers. Second, they highlight a new avenue toward developing a predictable trait for wood decomposition that could improve Earth Systems modeling, which has historically been challenged in predicting carbon sequestered/released by wood, where most of Earth's aboveground biotic carbon resides.

摘要

由于在定殖和保卫木材领地的分解者之间存在复杂的演替动态,预测木材分解具有挑战性。这始于腐生真菌,它们潜伏在健康木材中,直到树木衰老,但这些“内生菌”很少被视为一种可能改善对分解速率或命运预测的内源木材特性。在这里,我们采用重复测量的方法来追踪纸桦()和红松()的分解过程,在美国明尼苏达州的北方森林中评估了5年期间的木材特性和微生物演替。我们比较了健康木材中存在的真菌和细菌(内生菌)与作为外部定殖者到来的真菌和细菌,并采用相关处理来改变定殖者的可及性(地面接触与地上;去皮与带皮)。在5年的时间里,可及性处理对腐烂速率和真菌群落演替有显著影响。木材腐烂类型均为白腐(木质素降解真菌),但真菌优势度因处理而异。大多数优势真菌可追溯到作为内生菌存在于健康木材中的操作分类单元(OTU),这表明处理对内生菌竞争的影响大于对外部定殖者成功定殖的影响,即使在地面接触的情况下也是如此。尽管随着某些分类群占主导地位,真菌群落失去了多样性(香农指数),但细菌群落无论处理如何都趋于一致,与真菌没有明显的共现,也没有失去多样性,这表明存在解耦动态。结果表明腐生真菌作为内生菌定殖于树木具有战略优势,并且支持将真菌内生菌及其竞争成功的预测因子作为“植物”特性纳入,以改进预测模型。重要性在长期研究中,如果没有重复测量,就不可能确定内生腐生菌的这种持久性和影响。我们认为我们的发现具有重要意义,主要有两个原因。第一,它们将群落演替与木材中的一种“特性”联系起来,这种特性可能比预测外部定殖者的组装历史更具可预测性——由活树作为“守门人”控制。第二,它们突出了一条开发可预测木材分解特性的新途径,这可以改进地球系统建模,而地球系统建模在预测木材固存/释放的碳方面一直面临挑战,而地球上大部分地上生物碳都存在于木材中。

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