从泰国一处太阳能盐场分离出的嗜盐古菌沃氏嗜盐栖热菌PC0224的全基因组序列。
Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand.
作者信息
Phatcharaharikarn Manassanan, Ruangsuj Pattarawan, Songngamsuk Thunwarat, Santaweesuk Parweenuch, Tangwattanachuleeporn Marut, Srisucharitpanit Kanokporn, Wongchitrat Prapimpun, Yasawong Montri
机构信息
Programme on Environmental Toxicology, Chulabhorn Graduate Institute, Bangkok, 10210, Thailand.
Faculty of Allied Health Sciences, Burapha University, 169 Long- Hard Bangsean Road, Saensuk Sub-district, Mueang Chon Buri District, Chon Buri Province, 20130, Thailand.
出版信息
BMC Genom Data. 2025 Aug 18;26(1):58. doi: 10.1186/s12863-025-01353-y.
OBJECTIVES
Haloferax volcanii is an extreme halophile belonging to the Haloferacaceae family that thrives in hypersaline environments. This study presents the complete genome sequence of the H. volcanii strain PC0224 isolated from a Thai solar saltern. Genomic data will enhance our understanding of circadian rhythm mechanisms and their evolutionary significance in extremophilic archaea.
DATA DESCRIPTION
The H. volcanii PC0224 genome comprises four circular sequences containing 3,773,977 bp and 66.16% GC content. Sequenced using Illumina and PacBio technologies and assembled with Hybracter, the genome contained 3,731 CDS, 6 rRNAs, 54 tRNAs, 2 ncRNAs, and 4 CRISPR arrays. This dataset enables the investigation of circadian rhythm regulatory systems and comparative genomic studies of temporal adaptation mechanisms in extremophilic archaea.
目的
嗜盐栖热菌是嗜盐栖热菌科的一种极端嗜盐菌，在高盐环境中生长旺盛。本研究展示了从泰国盐场分离出的嗜盐栖热菌PC0224菌株的完整基因组序列。基因组数据将增进我们对极端嗜盐古菌昼夜节律机制及其进化意义的理解。
数据描述
嗜盐栖热菌PC0224基因组由四个环状序列组成，包含3,773,977碱基对，GC含量为66.16%。该基因组采用Illumina和PacBio技术测序，并使用Hybracter进行组装，包含3,731个编码序列、6个核糖体RNA、54个转运RNA、2个非编码RNA和4个CRISPR阵列。该数据集有助于研究昼夜节律调节系统以及极端嗜盐古菌时间适应机制的比较基因组学研究。
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