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FAR1作为急性肾损伤中与铁死亡相关的生物标志物和潜在治疗靶点:综合生物信息学与实验验证

FAR1 as a ferroptosis-related biomarker and potential therapeutic target in acute kidney injury: integrated bioinformatics and experimental validation.

作者信息

Duan Hao, Yan Jie, Fan Xingyu, Du Yijun, Zhong Xing, Pan Tianrong, Wang Yue

机构信息

Department of Endocrinology, The Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui Province, China.

Research Center for Translational Medicine, The Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui Province, China.

出版信息

Ren Fail. 2025 Dec;47(1):2547260. doi: 10.1080/0886022X.2025.2547260. Epub 2025 Aug 19.

Abstract

BACKGROUND

Emerging evidence underscores the critical involvement of ferroptosis in the pathophysiology of AKI. However, the role of ferroptosis-related genes (FRGs) in AKI remains insufficiently explored. This study sought to identify potential FRGs associated with AKI through bioinformatics approaches and experimental validation.

METHODS

AKI-related datasets and FRGs were first collected. Differentially expressed FRGs linked to AKI were identified through analytical methods, followed by an examination of their biological functions. Diagnostic biomarkers were then selected using LASSO, RFE, and RF algorithms. Additionally, small pharmacological molecules associated with DE-FRGs were identified to explore the connection between DE-FRGs and AKI. qRT-PCR analysis revealed FAR1 expression in AKI, while Western blotting and IHC confirmed corresponding FAR1 protein changes in kidney tissues. TUNEL staining confirmed cell death in AKI. ROS production and ferroptosis markers were evaluated in FAR1-knockdown and FAR1-overexpressing HK-2 cells.

RESULTS

A total of 106 DE-FRGs were identified, with functional enrichment analysis revealing strong associations with the MAPK and mTOR signaling pathways, as well as ferroptosis. Eight diagnostic biomarkers were selected using multiple algorithms, and their predictive accuracy was validated through ROC curve analysis. Furthermore, 13 pharmacological molecules were identified to establish a relationship between DE-FRGs and AKI. AKI renal tissue exhibited elevated cell death and reduced FAR1 expression. , FAR1 knockdown in HK-2 cells increased ROS and ferroptosis markers, while FAR1 overexpression rescued these phenotypes.

CONCLUSION

This study identified signaling pathways and small molecules associated with DE-FRGs in AKI. FAR1 was also identified as a potential diagnostic biomarker for AKI.

摘要

背景

新出现的证据强调了铁死亡在急性肾损伤病理生理学中的关键作用。然而,铁死亡相关基因(FRGs)在急性肾损伤中的作用仍未得到充分探索。本研究旨在通过生物信息学方法和实验验证来识别与急性肾损伤相关的潜在FRGs。

方法

首先收集急性肾损伤相关数据集和FRGs。通过分析方法识别与急性肾损伤相关的差异表达FRGs,随后检查其生物学功能。然后使用LASSO、RFE和RF算法选择诊断生物标志物。此外,识别与差异表达FRGs相关的小药理分子,以探索差异表达FRGs与急性肾损伤之间的联系。qRT-PCR分析揭示了急性肾损伤中FAR1的表达,而蛋白质印迹和免疫组化证实了肾组织中相应的FAR1蛋白变化。TUNEL染色证实了急性肾损伤中的细胞死亡。在FAR1敲低和FAR1过表达的HK-2细胞中评估活性氧生成和铁死亡标志物。

结果

共鉴定出106个差异表达FRGs,功能富集分析显示它们与MAPK和mTOR信号通路以及铁死亡密切相关。使用多种算法选择了8个诊断生物标志物,并通过ROC曲线分析验证了它们的预测准确性。此外,鉴定出13种药理分子,以建立差异表达FRGs与急性肾损伤之间的关系。急性肾损伤肾组织表现出细胞死亡增加和FAR1表达降低。HK-2细胞中FAR1敲低增加了活性氧和铁死亡标志物,而FAR1过表达挽救了这些表型。

结论

本研究确定了与急性肾损伤中差异表达FRGs相关的信号通路和小分子。FAR1也被确定为急性肾损伤的潜在诊断生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f9b/12366510/a407a168ac5f/IRNF_A_2547260_UF0001_C.jpg

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