Sarnik Sylvia A, Martinsen Mia R, Korman Tyler P, Schwartz Daniel K, Kaar Joel L, Bomble Yannick J
Department of Chemical and Biological Engineering, University of Colorado, Boulder, Colorado 80309, United States.
Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, United States.
ACS Sustain Chem Eng. 2025 Aug 6;13(32):12971-12980. doi: 10.1021/acssuschemeng.5c03763. eCollection 2025 Aug 18.
Cell-free biocatalysis is a rapidly evolving field with great potential for sustainably producing valuable chemicals. Some challenges in cell-free biocatalysis include reaction longevity, enzyme stability, and the cost of the biocatalysts. Here, the challenge of enzyme instability was addressed by employing thermophilic enzymes to improve the productivity of the lower mevalonate pathway, using limonene as an example isoprenoid product. The Classical mesophilic mevalonate pathway was compared to a newly assembled set of thermophilic enzymes comprising the Archaea I mevalonate pathway. The thermophilic pathway enzymes were thermostable to at least 60 °C and exhibited a 6× longer operating lifetime at 22 °C. Thus, despite lower initial activity rates at ambient temperature, the thermophilic pathway was longer-lived and resulted in a more productive cell-free reaction overall, achieving 1.7× higher yield of limonene compared to using enzymes from mesophiles. Moreover, the thermostable pathway retained activity for longer with the challenge of solvent exposure, namely, ethanol and isoprenol, which broadens the scope of accessible substrates and/or products in cell-free reactions employing this pathway. Altogether, we showed significant improvement in the stability and productivity of the lower mevalonate pathway, which will enable more efficient cell-free biosynthesis of isoprenoid products. This represents a valuable strategy to increase the robustness of cell-free systems by carefully sourcing biocatalysts from thermophilic organisms, which have proven to be resilient to challenges unique to cell-free reaction systems.
无细胞生物催化是一个快速发展的领域,在可持续生产有价值的化学品方面具有巨大潜力。无细胞生物催化面临的一些挑战包括反应寿命、酶稳定性和生物催化剂成本。在此,通过使用嗜热酶来提高甲羟戊酸途径下游的生产力,以柠檬烯作为类异戊二烯产物的示例,解决了酶不稳定的挑战。将经典的嗜温甲羟戊酸途径与一组新组装的包含古菌I甲羟戊酸途径的嗜热酶进行了比较。嗜热途径的酶在至少60°C时具有热稳定性,并且在22°C下的运行寿命延长了6倍。因此,尽管在环境温度下初始活性速率较低,但嗜热途径的寿命更长,总体上导致无细胞反应更高效,与使用嗜温菌的酶相比,柠檬烯产量提高了1.7倍。此外,在暴露于溶剂(即乙醇和异戊醇)的情况下,热稳定途径的活性保持时间更长,这拓宽了使用该途径的无细胞反应中可利用的底物和/或产物的范围。总之,我们展示了甲羟戊酸途径下游在稳定性和生产力方面的显著提高,这将使类异戊二烯产物的无细胞生物合成更加高效。这代表了一种通过精心选择来自嗜热生物的生物催化剂来提高无细胞系统稳健性的有价值策略,事实证明嗜热生物对无细胞反应系统特有的挑战具有抗性。