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亚麻(L.)中GRAS基因的全基因组分析揭示了作为抗旱关键调节因子。

Genome-wide profiling of GRAS genes in flax ( L.) reveals as a key regulator of drought stress resistance.

作者信息

Bao Yihang, Pan Chulin

机构信息

Department of Plant Sciences, Jilin University, Changchun, China.

College of Biology and Agricultural Engineering, Jilin University, Changchun, China.

出版信息

GM Crops Food. 2025 Dec;16(1):539-561. doi: 10.1080/21645698.2025.2548639. Epub 2025 Aug 25.

Abstract

GRAS genes are indispensable for modulating plant growth, developmental patterning, and adaptive responses to biotic and abiotic stress conditions. In this study, 99 genes were identified in the flax genome. Phylogenetic analysis classified them into 10 subfamilies: HAM, DELLA, DLT, SCL3, LAS, SCL4/7, SCR, SCL, SHR, and PAT1. Gene structure and motif analyses revealed that genes within the same clade exhibited conserved exon-intron organization and motif architectures. Promoter analysis showed that most genes contained cis-regulatory elements responsive to plant hormones (MeJA and abscisic acid) and abiotic stresses, including anaerobic induction, low temperature, and drought inducibility. MiRNA target prediction indicated that lus-miR395 is the primary regulatory miRNA for the gene family. Expression pattern analysis demonstrated that all family members were highly expressed in leaves and roots. qRT-PCR analysis further revealed that 10 genes were significantly upregulated under abiotic stresses (cold, drought, and salt), suggesting their involvement in antioxidant defense mechanisms. In , enhanced drought tolerance by scavenging reactive oxygen species (ROS) accumulation. Subcellular localization analysis demonstrated that was localized in the nucleus. This study provides new insights into the role of genes in flax stress tolerance and contributes to flax breeding and further functional research.

摘要

GRAS基因对于调节植物生长、发育模式以及对生物和非生物胁迫条件的适应性反应不可或缺。在本研究中,在亚麻基因组中鉴定出99个基因。系统发育分析将它们分为10个亚家族:HAM、DELLA、DLT、SCL3、LAS、SCL4/7、SCR、SCL、SHR和PAT1。基因结构和基序分析表明,同一进化枝内的基因表现出保守的外显子-内含子组织和基序结构。启动子分析表明,大多数基因含有对植物激素(茉莉酸甲酯和脱落酸)和非生物胁迫有响应的顺式调控元件,包括厌氧诱导、低温和干旱诱导。miRNA靶标预测表明,lus-miR395是该基因家族的主要调控miRNA。表达模式分析表明,所有家族成员在叶和根中均高度表达。qRT-PCR分析进一步揭示,10个基因在非生物胁迫(冷、干旱和盐)下显著上调,表明它们参与抗氧化防御机制。在……中,通过清除活性氧(ROS)积累增强了耐旱性。亚细胞定位分析表明……定位于细胞核。本研究为GRAS基因在亚麻胁迫耐受性中的作用提供了新见解,并有助于亚麻育种和进一步的功能研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c64e/12380220/6bcd30d9f0a4/KGMC_A_2548639_F0001_OC.jpg

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