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生物医学摘要的句子对齐简化

Sentence-Aligned Simplification of Biomedical Abstracts.

作者信息

Ondov Brian, Demner-Fushman Dina

机构信息

Yale School of Medicine, 333 Cedar St, New Haven, CT 06510, USA.

National Library of Medicine, Bethesda, MD, USA.

出版信息

Artif Intell Med Conf Artif Intell Med (2005-). 2024;14844:322-333. doi: 10.1007/978-3-031-66538-7_32. Epub 2024 Jul 25.

DOI:10.1007/978-3-031-66538-7_32
PMID:40855873
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12377474/
Abstract

The availability of biomedical abstracts in online databases could improve health literacy and drive more informed choices. However, the technical language of these documents makes them inaccessible to healthcare consumers, causing disengagement, frustration and potential misuse. In this work we explore adapting foundation language models to the Plain Language Adaptation of Biomedical Abstracts benchmark. This task is challenging because it requires sentence-by-sentence simplifications, but entire abstracts must also be simplified cohesively. We present a sentence-wise autoregressive approach and report experiments with this technique in both zero-shot and fine-tuned settings, using both proprietary and open-source models. We also introduce a stochastic regularization technique to encourage recovery from source-copying during autoregressive inference. Our best-performing model achieves a 32 point increase in SARI and 6 point increase in BERTscore over the reported state-of-the-art. This also surpasses performance of recent open-domain and biomedical sentence simplification models on this task. Further, in manual evaluation, models achieve factual accuracy comparable to human-level, with simplicity close to that of humans. Abstracts simplified by these models could unlock a massive source of health information while retaining clear provenance for each statement to enhance trustworthiness.

摘要

在线数据库中生物医学摘要的可用性可以提高健康素养,并促使人们做出更明智的选择。然而,这些文档的专业技术语言使医疗保健消费者难以理解,导致他们失去兴趣、感到沮丧并可能产生误用。在这项工作中,我们探索将基础语言模型应用于生物医学摘要的通俗易懂语言改编基准测试。这项任务具有挑战性,因为它需要逐句简化,但整个摘要也必须连贯地简化。我们提出了一种逐句自回归方法,并报告了在零样本和微调设置下使用专有模型和开源模型对该技术进行的实验。我们还引入了一种随机正则化技术,以鼓励在自回归推理过程中从复制原文中恢复过来。我们表现最佳的模型在SARI上提高了32分,在BERTscore上提高了6分,超过了已报道的最新技术水平。这也超过了近期在该任务上的开放域和生物医学句子简化模型的性能。此外,在人工评估中,模型在事实准确性方面达到了与人类相当的水平,简单程度也接近人类。这些模型简化的摘要可以释放大量的健康信息来源,同时为每条陈述保留清晰的出处以增强可信度。

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本文引用的文献

1
A dataset for plain language adaptation of biomedical abstracts.生物医学文摘的自然语言适应数据集。
Sci Data. 2023 Jan 4;10(1):8. doi: 10.1038/s41597-022-01920-3.
2
A survey of automated methods for biomedical text simplification.生物医学文本简化的自动化方法调查。
J Am Med Inform Assoc. 2022 Oct 7;29(11):1976-1988. doi: 10.1093/jamia/ocac149.
3
Paragraph-level Simplification of Medical Texts.医学文本的段落级简化
Proc Conf. 2021 Jun;2021:4972-4984. doi: 10.18653/v1/2021.naacl-main.395.
4
Low health literacy and health outcomes: an updated systematic review.低健康素养与健康结局:一项更新的系统评价。
Ann Intern Med. 2011 Jul 19;155(2):97-107. doi: 10.7326/0003-4819-155-2-201107190-00005.