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重新审视屈光不正的跨祖先遗传相关性。

Revisiting the Trans-Ancestry Genetic Correlation of Refractive Error.

作者信息

Clark Rosie, He Xi, Nguyen Thu Nga, Bui Thanh Huyen, Noor Hannah, Williams Cathy, Terry Louise, Guggenheim Jeremy A

机构信息

School of Optometry & Vision Sciences, Cardiff University, Cardiff, United Kingdom.

https://orcid.org/0000-0003-1247-4636.

出版信息

Invest Ophthalmol Vis Sci. 2025 Aug 1;66(11):60. doi: 10.1167/iovs.66.11.60.

DOI:10.1167/iovs.66.11.60
PMID:40856652
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12395803/
Abstract

PURPOSE

The prevalence of myopia varies significantly across the globe. This may be a consequence of differences in exposure to lifestyle risk factors or differences in genetic susceptibility across ancestry groups. "Trans-ancestry genetic correlation" quantifies the similarity in genetic predisposition to a trait or disease between different populations. We estimated the trans-ancestry genetic correlation of refractive error across Europeans, South Asians, East Asians, and Africans using recently developed approaches.

METHODS

Two methods were applied: (1) trans-ancestry genetic correlation with unbalanced data resources (TAGC-UDR) and (2) trans-ancestry bivariate genomic-relatedness-based restricted maximum-likelihood (TAB-GREML). TAGC-UDR analyses were carried out for UK Biobank participants of European (n = 3500), East Asian (n = 972), South Asian (n = 4303), and African (n = 3877) ancestry. TAB-GREML analyses were carried out for participants of European (n = 10,000), South Asian (n = 4303), and African (n = 3877) ancestry.

RESULTS

TAGC-UDR analyses suggested the trans-ancestry genetic correlation of refractive error was in the range 0.7-1.0 for the European versus African, European versus East Asian, and European versus South Asian ancestry pairs. The TAB-GREML estimates were consistent with the TAGC-UDR findings. Precision of the estimates was limited, reflecting the modest sample sizes of the non-European samples.

CONCLUSIONS

These results support and extend previous work suggesting that genetic susceptibility to refractive error is largely shared across Europeans, Africans, and South Asians. This suggests geographical differences in myopia prevalence are mostly driven by lifestyle factors or rare genetic variants not considered in the current work.

摘要

目的

全球近视患病率差异显著。这可能是生活方式风险因素暴露差异或不同祖先群体遗传易感性差异所致。“跨祖先遗传相关性”量化了不同人群对某一性状或疾病的遗传易感性相似性。我们使用最新开发的方法估计了欧洲人、南亚人、东亚人和非洲人屈光不正的跨祖先遗传相关性。

方法

应用了两种方法:(1)基于不平衡数据资源的跨祖先遗传相关性(TAGC-UDR)和(2)基于跨祖先双变量基因组相关性的受限最大似然法(TAB-GREML)。对欧洲(n = 3500)、东亚(n = 972)、南亚(n = 4303)和非洲(n = 3877)血统的英国生物银行参与者进行了TAGC-UDR分析。对欧洲(n = 10,000)、南亚(n = 4303)和非洲(n = 3877)血统的参与者进行了TAB-GREML分析。

结果

TAGC-UDR分析表明,欧洲与非洲、欧洲与东亚、欧洲与南亚血统对之间屈光不正的跨祖先遗传相关性在0.7-1.0范围内。TAB-GREML估计结果与TAGC-UDR的发现一致。估计的精度有限,反映出非欧洲样本的样本量较小。

结论

这些结果支持并扩展了先前的研究工作,表明欧洲人、非洲人和南亚人对屈光不正的遗传易感性在很大程度上是共同的。这表明近视患病率的地理差异主要由生活方式因素或当前研究未考虑的罕见遗传变异驱动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6744/12395803/3fbc6b3942c8/iovs-66-11-60-f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6744/12395803/3fbc6b3942c8/iovs-66-11-60-f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6744/12395803/3fbc6b3942c8/iovs-66-11-60-f002.jpg

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本文引用的文献

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J Am Stat Assoc. 2024;119(546):839-850. doi: 10.1080/01621459.2024.2344703. Epub 2024 May 21.
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Green Space Morphology and School Myopia in China.中国的绿地形态与近视
JAMA Ophthalmol. 2024 Feb 1;142(2):115-122. doi: 10.1001/jamaophthalmol.2023.6015.
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A multiethnic genome-wide analysis of 19,420 individuals identifies novel loci associated with axial length and shared genetic influences with refractive error and myopia.
对19420名个体进行的多民族全基因组分析确定了与眼轴长度相关的新基因座,以及与屈光不正和近视的共同遗传影响。
Front Genet. 2023 Jun 7;14:1113058. doi: 10.3389/fgene.2023.1113058. eCollection 2023.
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Impact of cross-ancestry genetic architecture on GWASs in admixed populations.混合人群中跨血统遗传结构对 GWAS 的影响。
Am J Hum Genet. 2023 Jun 1;110(6):927-939. doi: 10.1016/j.ajhg.2023.05.001. Epub 2023 May 23.
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Unique Haplotypes in OPN1LW as a Common Cause of High Myopia With or Without Protanopia: A Potential Window Into Myopic Mechanism.OPN1LW 中的独特单倍型是伴或不伴红绿色盲的高度近视的常见原因:近视机制的潜在窗口。
Invest Ophthalmol Vis Sci. 2023 Apr 3;64(4):29. doi: 10.1167/iovs.64.4.29.
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A new polygenic score for refractive error improves detection of children at risk of high myopia but not the prediction of those at risk of myopic macular degeneration.一个新的屈光不正多基因评分可提高对高度近视风险儿童的检出率,但不能提高对近视性黄斑变性风险儿童的预测率。
EBioMedicine. 2023 May;91:104551. doi: 10.1016/j.ebiom.2023.104551. Epub 2023 Apr 11.
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A method for an unbiased estimate of cross-ancestry genetic correlation using individual-level data.一种使用个体水平数据进行无偏交叉血统遗传相关估计的方法。
Nat Commun. 2023 Feb 9;14(1):722. doi: 10.1038/s41467-023-36281-x.
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Br J Ophthalmol. 2023 Oct;107(10):1545-1553. doi: 10.1136/bjo-2022-321511. Epub 2022 Sep 30.
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