• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

对从癌症患者中分离出的菌株进行全基因组测序。

Whole Genome Sequencing of Strains Isolated from Patients with Cancer.

作者信息

Sękowska Alicja, Carrazco-Montalvo Andrés, Konechnyi Yulian

机构信息

Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, 85-094 Bydgoszcz, Poland.

Department of Clinical Microbiology, Dr. A. Jurasz University Hospital No. 1 in Bydgoszcz, 85-094 Bydgoszcz, Poland.

出版信息

Antibiotics (Basel). 2025 Jul 22;14(8):735. doi: 10.3390/antibiotics14080735.

DOI:10.3390/antibiotics14080735
PMID:40867930
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12382703/
Abstract

is a Gram-negative, capsulated, nonmotile, facultative anaerobic rod. It is one of the species belonging to the . The objective of this study was to gain insights into the antimicrobial resistance and virulence of strains isolated from clinical samples from oncologic patients. Strain identification was performed using a mass spectrometry method. Whole genome sequencing was conducted for all analyzed strains. Antimicrobial susceptibility was determined using an automated method. The presence of antimicrobial resistance mechanisms and genes encoding extended-spectrum beta-lactamases (ESBL) was assessed using the double-disc synergy test and genotypic methods. All isolates were identified as using mass spectrometry and whole genome sequencing (WGS). All isolates were ESBL-positive, and two of them harbored the gene. In our study, the gene was detected in all strains. Genome sequence analysis of the isolates revealed the presence of virulence factor genes, including , , , , and . Two different plasmids, IncFIB(K) and IncFII, were identified in all of the analyzed strains. The detected virulence factors suggest the ability of the bacteria to survive in the environment and infect host cells. All isolates demonstrated in vitro susceptibility to carbapenems. Further studies are needed to confirm whether multidrug-resistant strains represent an important pathogen in infections among oncologic patients.

摘要

是一种革兰氏阴性、有荚膜、无动力、兼性厌氧的杆菌。它是属于……的物种之一。本研究的目的是深入了解从肿瘤患者临床样本中分离出的……菌株的抗菌耐药性和毒力。使用质谱法进行菌株鉴定。对所有分析菌株进行全基因组测序。使用自动化方法测定抗菌药物敏感性。使用双碟协同试验和基因分型方法评估抗菌耐药机制和编码超广谱β-内酰胺酶(ESBL)的基因的存在情况。所有分离株通过质谱法和全基因组测序(WGS)鉴定为……。所有分离株均为ESBL阳性,其中两株携带……基因。在我们的研究中,所有菌株均检测到……基因。对……分离株的基因组序列分析显示存在毒力因子基因,包括……、……、……、……和……。在所有分析的……菌株中鉴定出两种不同的质粒,IncFIB(K)和IncFII。检测到的毒力因子表明细菌在环境中生存和感染宿主细胞的能力。所有分离株在体外对碳青霉烯类药物敏感。需要进一步研究以确认多重耐药的……菌株是否是肿瘤患者感染中的重要病原体。

相似文献

1
Whole Genome Sequencing of Strains Isolated from Patients with Cancer.对从癌症患者中分离出的菌株进行全基因组测序。
Antibiotics (Basel). 2025 Jul 22;14(8):735. doi: 10.3390/antibiotics14080735.
2
Outbreak of NDM-5-producing in intensive care units: an overlooked pathogen in Argentina?重症监护病房中产NDM-5细菌的暴发:阿根廷一种被忽视的病原体?
Microbiol Spectr. 2025 Aug 5;13(8):e0067225. doi: 10.1128/spectrum.00672-25. Epub 2025 Jun 23.
3
Genomic surveillance for multidrug-resistant or hypervirulent Klebsiella pneumoniae among United States bloodstream isolates.美国血流感染分离株中多重耐药或高毒力肺炎克雷伯菌的基因组监测。
BMC Infect Dis. 2022 Jul 7;22(1):603. doi: 10.1186/s12879-022-07558-1.
4
Whole-Genome Sequencing and Bioinformatics Analysis of ESBL- producing Klebsiella pneumoniae in a Ghanaian teaching hospital.加纳一家教学医院产超广谱β-内酰胺酶肺炎克雷伯菌的全基因组测序及生物信息学分析
BMC Microbiol. 2025 Jul 2;25(1):401. doi: 10.1186/s12866-025-04101-5.
5
ESBL-producing Klebsiella Pneumoniae isolated from dairy cows with pneumonia: insight into their epidemiology, genetic features and antimicrobial resistance profiles.从患肺炎的奶牛中分离出的产超广谱β-内酰胺酶肺炎克雷伯菌:对其流行病学、基因特征及抗菌药物耐药谱的深入了解
Microb Pathog. 2025 Oct;207:107909. doi: 10.1016/j.micpath.2025.107909. Epub 2025 Jul 14.
6
Antimicrobial resistance and molecular epidemiology of Klebsiella pneumoniae isolated from bovine mastitis in seven provinces in China.中国七个省份牛乳腺炎分离的肺炎克雷伯菌的耐药性及分子流行病学
BMC Microbiol. 2025 Jul 3;25(1):407. doi: 10.1186/s12866-025-04147-5.
7
Antimicrobial resistance and phylogenetic lineages of KPC-2-producing blood-borne subsp. from Kolkata, India during 2015-2024: Emergence of subsp. with , , and triple carbapenemases.2015年至2024年期间来自印度加尔各答的产KPC-2血源亚种的抗菌药物耐药性和系统发育谱系:具有NDM-1、IMP-1和VIM-2三重碳青霉烯酶的亚种的出现。
Microbiol Spectr. 2025 Jun 12:e0012625. doi: 10.1128/spectrum.00126-25.
8
Molecular epidemiology of extended-spectrum beta-lactamase-producing bloodstream infections from Aberdeen, Scotland, and their comparison to isolates from England.苏格兰阿伯丁产超广谱β-内酰胺酶血流感染的分子流行病学及其与英格兰分离株的比较。
Microb Genom. 2025 Jun;11(6). doi: 10.1099/mgen.0.001413.
9
Genomic characterization of an ESBL-producing ST37 recovered from a hospitalized patient in Armenia.从亚美尼亚一名住院患者身上分离出的产超广谱β-内酰胺酶的ST37菌株的基因组特征分析。
Microbiol Spectr. 2025 Jul 30:e0033225. doi: 10.1128/spectrum.00332-25.
10
Emergence of drug-resistant phylogroups ( and ) causing human infections.导致人类感染的耐药菌系(和)的出现。
Microbiol Spectr. 2025 Sep 2;13(9):e0019825. doi: 10.1128/spectrum.00198-25. Epub 2025 Aug 8.

本文引用的文献

1
fosA7: a silent fosfomycin resistance gene in Salmonella?fosA7:沙门氏菌中的一个沉默的磷霉素抗性基因?
Lancet Microbe. 2024 Mar;5(3):e211. doi: 10.1016/S2666-5247(23)00342-7. Epub 2023 Nov 23.
2
Prevalence, clonal diversity, and antimicrobial resistance of hypervirulent Klebsiella pneumoniae and Klebsiella variicola clinical isolates in northern Japan.日本北部高毒力肺炎克雷伯菌和产酸克雷伯菌临床分离株的流行率、克隆多样性和抗菌药物耐药性。
J Glob Antimicrob Resist. 2023 Dec;35:11-18. doi: 10.1016/j.jgar.2023.08.009. Epub 2023 Aug 20.
3
Carbapenem resistance in Enterobacterales bloodstream infections among children with cancer or post-haematopoietic stem cell transplant: a retrospective cohort study.
儿童癌症或造血干细胞移植后血流感染中的肠杆菌科碳青霉烯耐药:一项回顾性队列研究。
J Antimicrob Chemother. 2023 Oct 3;78(10):2462-2470. doi: 10.1093/jac/dkad255.
4
Carbapenem-Resistant (CRE) among Children with Cancer: Predictors of Mortality and Treatment Outcome.癌症患儿中的耐碳青霉烯类肠杆菌科细菌(CRE):死亡率和治疗结果的预测因素
Antibiotics (Basel). 2023 Feb 17;12(2):405. doi: 10.3390/antibiotics12020405.
5
Clinical characteristics and antimicrobial susceptibility of , and isolated from human urine in Japan.从日本人体尿液中分离的 、 及 的临床特征和抗菌药物敏感性。
J Med Microbiol. 2022 Jun;71(6). doi: 10.1099/jmm.0.001546.
6
Antimicrobial Resistance and Virulence Characteristics of Isolates in Kenya by Whole-Genome Sequencing.通过全基因组测序分析肯尼亚分离株的抗菌药物耐药性和毒力特征
Pathogens. 2022 May 5;11(5):545. doi: 10.3390/pathogens11050545.
7
Correction to: Clinical characteristics in blood stream infections caused by Klebsiella pneumoniae, Klebsiella variicola, and Klebsiella quasipneumoniae: a comparative study, Japan, 2014-2017.对《肺炎克雷伯菌、Variicola克雷伯菌和准肺炎克雷伯菌引起的血流感染的临床特征:一项比较研究,日本,2014 - 2017年》的更正
BMC Infect Dis. 2022 May 4;22(1):425. doi: 10.1186/s12879-022-07384-5.
8
WGS-Based Phenotyping and Molecular Characterization of the Resistome, Virulome and Plasmid Replicons in Isolates from Powdered Milk Produced in Germany.基于全基因组测序对德国生产的奶粉分离株中耐药基因组、毒力基因组和质粒复制子的表型分析及分子特征研究
Microorganisms. 2022 Mar 5;10(3):564. doi: 10.3390/microorganisms10030564.
9
A nationwide genomic study of clinical Klebsiella pneumoniae in Norway 2001-15: introduction and spread of ESBLs facilitated by clonal groups CG15 and CG307.一项针对挪威 2001-15 年临床型肺炎克雷伯菌的全国性基因组研究:通过克隆群 CG15 和 CG307 促进了 ESBLs 的引入和传播。
J Antimicrob Chemother. 2022 Feb 23;77(3):665-674. doi: 10.1093/jac/dkab463.
10
Co-occurrence of and Both Carrying from a Respiratory Intensive Care Unit Patient.一名呼吸重症监护病房患者同时感染携带[具体内容缺失]和[具体内容缺失]。
Infect Drug Resist. 2021 Oct 29;14:4503-4510. doi: 10.2147/IDR.S330977. eCollection 2021.