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梨中FAD基因家族的全基因组鉴定及干旱胁迫响应表达谱分析

Genome-Wide Identification and Drought Stress-Responsive Expression Profiling of the FAD Gene Family in Pear.

作者信息

Zhang Ziyi, Li Zhikun, Zeng Yan, Zhu Yutong, Chu Wenxuan, Wu Ruigang, Wang Qingjiang

机构信息

School of Landscape and Ecological Engineering, Hebei University of Engineering, Handan 056038, China.

出版信息

Life (Basel). 2025 Aug 12;15(8):1279. doi: 10.3390/life15081279.

Abstract

Fatty acid desaturase (FAD) is a rate-limiting enzyme catalyzing the biosynthesis of unsaturated fatty acids (UFAs) and participates in key physiological processes such as plant growth and development, fruit ripening, and stress responses by regulating membrane lipid composition. Using pear genome data, this study systematically identified gene family members through bioinformatic analysis and characterized their drought-responsive expression patterns. Results revealed that 34 FAD family members were identified in pear, unevenly distributed across 12 chromosomes and classified into six subfamilies. Members within the same subfamily exhibited similar conserved domains and gene structures. Promoter element analysis demonstrated that pear FAD promoters contain cis-acting elements associated with plant growth and development, hormone responses, and abiotic stress responses. qRT-PCR expression profiling showed that and were significantly upregulated during the early stages of drought stress, followed by suppressed expression levels, suggesting their potential crucial regulatory roles in the initial drought response. Genome-wide identification of 34 PbrFAD family members highlighted that and , with marked upregulation under early drought stress, exhibit prominent drought responsiveness. This study provides valuable resistance gene resources for molecular breeding of stress-tolerant pear varieties and establishes a theoretical foundation for functional characterization of key drought-resistant candidate genes in pear.

摘要

脂肪酸去饱和酶(FAD)是催化不饱和脂肪酸(UFA)生物合成的限速酶,通过调节膜脂组成参与植物生长发育、果实成熟和应激反应等关键生理过程。本研究利用梨基因组数据,通过生物信息学分析系统鉴定了该基因家族成员,并对其干旱响应表达模式进行了表征。结果表明,在梨中鉴定出34个FAD家族成员,它们不均匀地分布在12条染色体上,分为6个亚家族。同一亚家族内的成员表现出相似的保守结构域和基因结构。启动子元件分析表明,梨FAD启动子含有与植物生长发育、激素反应和非生物胁迫反应相关的顺式作用元件。qRT-PCR表达谱显示,在干旱胁迫早期显著上调,随后表达水平受到抑制,表明它们在初始干旱反应中可能具有关键的调控作用。全基因组鉴定出34个PbrFAD家族成员,其中 和 在早期干旱胁迫下显著上调,表现出突出的干旱响应性。本研究为耐胁迫梨品种的分子育种提供了宝贵的抗性基因资源,并为梨中关键抗旱候选基因的功能表征奠定了理论基础。

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