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光学基因组图谱:细胞基因组分析的新工具。

Optical Genome Mapping: A New Tool for Cytogenomic Analysis.

作者信息

Levy Brynn, Burnside Rachel D, Akkari Yassmine

机构信息

Department of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Department of Pathology, Immunology, and Laboratory Medicine, University of Florida, Gainesville, FL 32610, USA.

出版信息

Genes (Basel). 2025 Jul 31;16(8):924. doi: 10.3390/genes16080924.

DOI:10.3390/genes16080924
PMID:40869972
Abstract

Optical genome mapping (OGM) has recently emerged as a new technology in the clinical cytogenomics laboratories. This methodology has the ability to detect balanced and unbalanced structural rearrangements using ultra-high molecular weight DNA. This article discusses the uses of this new technology in both constitutional and somatic settings, its advantages as well as opportunity for improvements. We reviewed the medical and scientific literature for methodology and current clinical uses of OGM. OGM is a recent addition to the methods used in cytogenomics laboratories and can detect a wide range of structural and copy number variations across a plethora of diseases. Clinical cytogenomics is an important laboratory specialty for which various technologies have been validated over the last several decades to improve detection of copy number and structural variations and their association to human disease. OGM has proven to be a powerful tool in the arsenal of clinical laboratories and provides a unified workflow for the detection of chromosomal aberrations across a wide range of diseases.

摘要

光学基因组图谱(OGM)最近已成为临床细胞基因组学实验室中的一项新技术。该方法能够使用超高分子量DNA检测平衡和不平衡的结构重排。本文讨论了这项新技术在遗传性和体细胞环境中的用途、其优势以及改进的机会。我们查阅了医学和科学文献,以了解OGM的方法和当前临床应用。OGM是细胞基因组学实验室使用的方法中的最新成员,可检测多种疾病中的广泛结构和拷贝数变异。临床细胞基因组学是一个重要的实验室专业领域,在过去几十年中,各种技术已经得到验证,以提高对拷贝数和结构变异及其与人类疾病关联的检测。OGM已被证明是临床实验室武器库中的一个强大工具,并为检测广泛疾病中的染色体畸变提供了统一的工作流程。

相似文献

1
Optical Genome Mapping: A New Tool for Cytogenomic Analysis.光学基因组图谱:细胞基因组分析的新工具。
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2
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本文引用的文献

1
Case Report: Optical genome mapping enables identification of complex balanced chromosomal rearrangements.病例报告:光学基因组图谱可用于识别复杂的平衡染色体重排。
Front Genet. 2025 May 22;16:1555485. doi: 10.3389/fgene.2025.1555485. eCollection 2025.
2
Genetic and functional characterization of inherited complex chromosomal rearrangements in a family with multisystem anomalies.一个患有多系统异常的家族中遗传性复杂染色体重排的遗传学和功能特征分析
Genet Med Open. 2025 Mar 11;3:103423. doi: 10.1016/j.gimo.2025.103423. eCollection 2025.
3
Clinical Utility of Optical Genome Mapping as an Additional Tool in a Standard Cytogenetic Workup in Hematological Malignancies.
光学基因组图谱作为血液系统恶性肿瘤标准细胞遗传学检查的辅助工具的临床应用
Cancers (Basel). 2025 Apr 25;17(9):1436. doi: 10.3390/cancers17091436.
4
Integration of Optical Genome Mapping in the Cytogenomic and Molecular Work-Up of Hematological Malignancies: Expert Recommendations From the International Consortium for Optical Genome Mapping.光学基因组图谱在血液系统恶性肿瘤细胞基因组和分子检查中的整合:国际光学基因组图谱联盟的专家建议
Am J Hematol. 2025 Jun;100(6):1029-1048. doi: 10.1002/ajh.27688. Epub 2025 Apr 30.
5
Optical Genome Mapping for Prenatal Diagnosis in Fetuses With Structural Anomalies.光学基因组图谱在结构异常胎儿产前诊断中的应用
Prenat Diagn. 2025 May;45(5):618-630. doi: 10.1002/pd.6798. Epub 2025 Apr 14.
6
FGF14 GAA Intronic Expansion in Unsolved Adult-Onset Ataxia in the Care4Rare Canada Consortium.加拿大Care4Rare联盟中未确诊的成人起病共济失调患者的FGF14基因内含子GAA重复扩增
Ann Clin Transl Neurol. 2025 Apr 7. doi: 10.1002/acn3.70016.
7
Cryptic Fusion Due to Insertion into in a Patient with Acute Monoblastic Leukemia.一名急性单核细胞白血病患者中因插入导致的隐匿性融合
Genes (Basel). 2025 Mar 7;16(3):317. doi: 10.3390/genes16030317.
8
Optical genome mapping enables accurate testing of large repeat expansions.光学基因组图谱能够对大型重复序列扩增进行准确检测。
Genome Res. 2025 Apr 14;35(4):810-823. doi: 10.1101/gr.279491.124.
9
Structural Variant Analysis of Complex Karyotype Myelodysplastic Neoplasia Through Optical Genome Mapping.通过光学基因组图谱对复杂核型骨髓增生异常综合征进行结构变异分析。
Genes Chromosomes Cancer. 2025 Jan;64(1):e70024. doi: 10.1002/gcc.70024.
10
Optical genome mapping to decipher the chromosomal aberrations in families seeking for preconception genetic counseling.光学基因组图谱技术用于解读寻求孕前遗传咨询的家庭中的染色体畸变情况。
Sci Rep. 2025 Jan 21;15(1):2614. doi: 10.1038/s41598-025-86828-9.