Chazin-Gray Adam M, Thompson Tuscan R, Lopatto Edward D B, Magala Pearl, Erickson Patrick W, Hunt Andrew C, Manchenko Anna, Aprikian Pavel, Tchesnokova Veronika, Basova Irina, Sanick Denise A, Tamadonfar Kevin O, Timm Morgan R, Pinkner Jerome S, Dodson Karen W, Kang Alex, Joyce Emily, Bera Asim K, Schmitz Aaron J, Ellebedy Ali H, Hvorecny Kelli L, Cartwright Mark J, Vernet Andyna, Bardales Sarai, White Desmond, Klevit Rachel E, Sokurenko Evgeni V, Hultgren Scott J, Baker David
Department of Biochemistry, University of Washington, Seattle, WA, USA.
Institute for Protein Design, University of Washington, Seattle, WA, USA.
bioRxiv. 2025 Aug 18:2025.08.18.670751. doi: 10.1101/2025.08.18.670751.
The rise of multidrug-resistant bacterial infections necessitates the discovery of novel antimicrobial strategies. Here, we show that protein design provides a generalizable means of generating new antimicrobials by neutralizing the function of bacterial adhesins, which are virulence factors critical in host-pathogen interactions. We designed high-affinity miniprotein binders to FimH and Abp1D/Abp2D chaperone usher pili adhesins from uropathogenic and , respectively, which are implicated in mediating both uncomplicated and catheter-associated urinary tract infections (UTI) responsible for significant morbidity and mortality worldwide. The designed antagonists have high specificity and stability, disrupt bacterial recognition of host receptors, block biofilm formation, and are effective in treating and preventing uncomplicated and catheter-associated UTIs . Targeting virulence factors outside the cell membrane with protein design provides a rapid route to next-generation therapeutics that can disrupt pathogenesis and thus are capable of treating and preventing disease in an antibiotic-sparing manner.
多重耐药细菌感染的增加使得发现新的抗菌策略成为必要。在此,我们表明蛋白质设计提供了一种通用方法,通过中和细菌黏附素的功能来产生新的抗菌剂,细菌黏附素是宿主 - 病原体相互作用中至关重要的毒力因子。我们设计了对FimH以及分别来自尿路致病性大肠杆菌的Abp1D/Abp2D伴侣 - 外膜蛋白菌毛黏附素具有高亲和力的微型蛋白质结合剂,这些黏附素分别与导致全球范围内显著发病率和死亡率的单纯性和导管相关性尿路感染(UTI)的介导有关。所设计的拮抗剂具有高特异性和稳定性,破坏细菌对宿主受体的识别,阻止生物膜形成,并且在治疗和预防单纯性和导管相关性UTI方面有效。用蛋白质设计靶向细胞膜外的毒力因子为新一代治疗方法提供了一条快速途径,这种治疗方法可以破坏发病机制,从而能够以节约抗生素的方式治疗和预防疾病。