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该基因家族在……中的鉴定与表达分析 。 (你提供的原文不完整,缺少关键信息,这是根据现有内容尽量完整翻译的结果 )

Identification and expression analysis of the gene family in .

作者信息

Shen Min, Wei Lijuan, Fu Chun

机构信息

Department of Agriculture, Forestry and Environmental Engineering, Changzhi Vocational and Technical College, Changzhi, Shanxi, China.

College of Agriculture and Biotechnology, Southwest University, Chongqing, China.

出版信息

Front Plant Sci. 2025 Aug 20;16:1641897. doi: 10.3389/fpls.2025.1641897. eCollection 2025.

Abstract

(Eukaryotic Transcription Factor 2/Dimerization Partner) refers to a class of protein complexes that play a pivotal role in the regulation of gene transcription in eukaryotes. In higher plants, transcription factors are of vital significance in mediating responses to environmental stresses. Based on differences in their conserved structural domains, they can be categorized into three subgroups: E2F, DP, and DEL (DP-E2F-like). Studies on in plants are relatively scarce, and no research on in napus has been reported to date. Utilize bioinformatics approaches to identify the gene family in . Construct a phylogenetic tree for evolutionary relationship analysis, and analyze the chromosomal distribution, gene structure composition, types of cis-acting elements, as well as intragenomic and interspecific collinearity. Integrate transcriptome data with real-time quantitative PCR (RT-qPCR) technology to explore the expression patterns of gene family members across various tissues. Total 29 genes were identified in and classified into 8 sub-families. These genes were unevenly distributed across 15 chromosomes, with enrichment on chromosomes 3 and 13. Intragenomic collinearity analysis detected 35 pairs of collinear gene pairs. Interspecific analysis revealed that there were 9 pairs of orthologous gene pairs between and . Cis-acting element analysis showed that members of the family harbored four types of cis-acting elements, which might be involved in multiple regulatory processes, including hormonal regulation, abiotic stress responses, light reactions, and growth and development. Transcriptome and quantitative PCR data analyses indicate that members of the subfamily are likely to actively regulate seed and embryo development and positively respond to various abiotic stresses.. The conserved motifs and gene structures within each subfamily are largely consistent, which indicates that plays a crucial role in the growth and development of rapeseed seeds and embryos, as well as in the response to various abiotic stresses.

摘要

(真核转录因子2/二聚化伴侣)指的是一类在真核生物基因转录调控中起关键作用的蛋白质复合物。在高等植物中,转录因子在介导对环境胁迫的反应中具有至关重要的意义。根据其保守结构域的差异,它们可分为三个亚组:E2F、DP和DEL(类DP-E2F)。植物中关于(此处原文缺失相关具体内容,无法准确翻译)的研究相对较少,迄今为止尚未有关于甘蓝型油菜中(此处原文缺失相关具体内容,无法准确翻译)的研究报道。利用生物信息学方法在(此处原文缺失相关具体内容,无法准确翻译)中鉴定(此处原文缺失相关具体内容,无法准确翻译)基因家族。构建系统发育树进行进化关系分析,并分析染色体分布、基因结构组成、顺式作用元件类型以及基因组内和种间共线性。将转录组数据与实时定量PCR(RT-qPCR)技术相结合,以探索(此处原文缺失相关具体内容,无法准确翻译)基因家族成员在不同组织中的表达模式。在(此处原文缺失相关具体内容,无法准确翻译)中总共鉴定出29个(此处原文缺失相关具体内容,无法准确翻译)基因,并分为8个亚家族。这些基因在15条染色体上分布不均,在3号和13号染色体上富集。基因组内共线性分析检测到35对共线性(此处原文缺失相关具体内容,无法准确翻译)基因对。种间分析表明,(此处原文缺失相关具体内容,无法准确翻译)和(此处原文缺失相关具体内容,无法准确翻译)之间有9对直系同源基因对。顺式作用元件分析表明,(此处原文缺失相关具体内容,无法准确翻译)家族成员含有四种类型的顺式作用元件,这可能参与多种调控过程,包括激素调节、非生物胁迫反应、光反应以及生长和发育。转录组和定量PCR数据分析表明,(此处原文缺失相关具体内容,无法准确翻译)亚家族成员可能积极调控种子和胚的发育,并对各种非生物胁迫产生积极响应。每个(此处原文缺失相关具体内容,无法准确翻译)亚家族内的保守基序和基因结构在很大程度上是一致的,这表明(此处原文缺失相关具体内容,无法准确翻译)在油菜种子和胚的生长发育以及对各种非生物胁迫的反应中起关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e19d/12405181/219a10323a9b/fpls-16-1641897-g001.jpg

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