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酿酒酵母中肌动蛋白调节蛋白旁系同源物的功能冗余和肌动蛋白结合蛋白异构体独立定位

Functional redundancy and formin-isoform independent localization of tropomyosin paralogs in Saccharomyces cerevisiae.

作者信息

Dhar Anubhav, Bagyashree V T, Biswas Sudipta, Kumari Jayanti, Sridhara Amruta, Jeevan Subodh B, Shekhar Shashank, Palani Saravanan

机构信息

Department of Biochemistry, Indian Institute of Science, Bengaluru, Karnataka, India.

Departments of Physics, Cell Biology and Biochemistry, Emory University, Atlanta, GeorgiaUnited States of America.

出版信息

PLoS Genet. 2025 Sep 9;21(9):e1011859. doi: 10.1371/journal.pgen.1011859. eCollection 2025 Sep.

Abstract

Tropomyosin is an actin-binding protein (ABP) which protects actin filaments from cofilin-mediated disassembly. Distinct tropomyosin isoforms have long been hypothesized to differentially sort to subcellular actin networks and impart distinct functionalities. Nevertheless, a mechanistic understanding of the interplay between Tpm isoforms and their functional contributions to actin dynamics has been lacking. In this study, we present and characterize mNeonGreen-Tpm fusion proteins that exhibit good functionality in cells as a sole copy, surpassing limitations of existing probes and enabling real-time dynamic tracking of Tpm-actin filaments in vivo. Using these functional Tpm fusion proteins, we find that S. cerevisiae Tpm isoforms, Tpm1 and Tpm2, colocalize on actin cables and indiscriminately bind to actin filaments nucleated by either formin isoform - Bnr1 and Bni1 in vivo, in contrast to the long-held paradigm of Tpm-formin pairing. We show that cellular Tpm levels regulate endocytosis by affecting the balance between linear and branched actin networks in yeast cells. Finally, we discover that Tpm2 can protect and organize functional actin cables in the absence of Tpm1. Overall, our work supports a concentration-dependent and formin isoform independent model of Tpm isoform binding to F-actin and demonstrates for the first time, the functional redundancy of the paralog Tpm2 in actin cable maintenance in S. cerevisiae.

摘要

原肌球蛋白是一种肌动蛋白结合蛋白(ABP),可保护肌动蛋白丝免受cofilin介导的解聚。长期以来,人们一直推测不同的原肌球蛋白异构体可差异地分选到亚细胞肌动蛋白网络中,并赋予不同的功能。然而,对于原肌球蛋白异构体之间的相互作用及其对肌动蛋白动力学的功能贡献,一直缺乏机制上的理解。在这项研究中,我们展示并表征了mNeonGreen-原肌球蛋白融合蛋白,该蛋白作为唯一拷贝在细胞中表现出良好的功能,超越了现有探针的局限性,并能够在体内实时动态跟踪原肌球蛋白-肌动蛋白丝。使用这些功能性原肌球蛋白融合蛋白,我们发现酿酒酵母原肌球蛋白异构体Tpm1和Tpm2共定位于肌动蛋白电缆上,并且在体内与由formin异构体Bnr1和Bni1成核的肌动蛋白丝无差别地结合,这与长期以来原肌球蛋白-formin配对的模式相反。我们表明,细胞中原肌球蛋白水平通过影响酵母细胞中线性和分支肌动蛋白网络之间的平衡来调节内吞作用。最后,我们发现Tpm2可以在没有Tpm1的情况下保护和组织功能性肌动蛋白电缆。总体而言,我们的工作支持了原肌球蛋白异构体与F-肌动蛋白结合的浓度依赖性和formin异构体独立性模型,并首次证明了旁系同源物Tpm2在酿酒酵母肌动蛋白电缆维持中的功能冗余性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c9fb/12440208/c4598ed09bfb/pgen.1011859.g001.jpg

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