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通过公共数据库中的线粒体DNA序列评估(双翅目:蚊科)的系统地理学模式和遗传多样性

Assessing Phylogeographic Patterns and Genetic Diversity in (Diptera: Culicidae) via mtDNA Sequences from Public Databases.

作者信息

García-Escobar Gian Carlo, González Juan José Trujillo, AguirreObando Oscar Alexander

机构信息

Escuela de investigación en Biomatemática, Universidad del Quindío. Carrera 15, Calle 12 Norte, Armenia, Quindío, Colombia. E-mail:

Programa de Licenciatura en Biología y Educación Ambiental, Facultad de Educación, Universidad del Quindío. Carrera 15, Calle 12 Norte, Armenia, Quindío, Colombia.

出版信息

Zool Stud. 2024 Dec 31;63:e58. doi: 10.6620/ZS.2024.63-58. eCollection 2024.

Abstract

To identify the worldwide genetic structure, gene flow, and diversity of , we conducted phylogeographic and population genetics analyses utilizing publicly available mtDNA sequences. Therefore, the aim of this study was to investigate the genetic structure and diversity of natural populations of worldwide, using available genetic data reflecting its natural distribution. Our study focused on the cytochrome oxidase subunit I () gene, mirroring the species' distribution pattern. We examined gene sequences from populations across Asia ( = 1,698), America ( = 334), Africa ( = 30), Oceania ( = 21), and Europe ( = 1), identifying 69 haplotypes. Genetic links were observed between Asian populations and those from other continents. Global genetic diversity was 0.531, varying from 0.095 in Oceania to 0.648 in South America. Neutrality tests indicated demographic expansions at the continental level in the Americas, North America, and Asia, as well as in some countries within these regions. In contrast, at both global and continental levels (South America, Oceania, and Africa), and in most countries within these continents, neutral populations were observed. AMOVA revealed genetic structuring among and within countries, with no genetic isolation observed ( = 0.03144; > 0.05). Despite lower genetic diversity, Asian populations facilitated gene flow with other continents, suggesting a possible native origin of the species in Asia. The dispersal of this mosquito to new regions, coupled with its ability to transmit various arboviruses, underscores its significance as a potential public health threat.

摘要

为了确定[物种名称]在全球的遗传结构、基因流动和多样性,我们利用公开可用的线粒体DNA序列进行了系统地理学和群体遗传学分析。因此,本研究的目的是利用反映其自然分布的现有遗传数据,调查[物种名称]全球自然种群的遗传结构和多样性。我们的研究聚焦于细胞色素c氧化酶亚基I(COI)基因,以反映该物种的分布模式。我们检查了来自亚洲(n = 1698)、美洲(n = 334)、非洲(n = 30)、大洋洲(n = 21)和欧洲(n = 1)的1984个种群的COI基因序列,鉴定出69个单倍型。观察到亚洲种群与其他大陆种群之间存在遗传联系。全球遗传多样性为0.531,从大洋洲的0.095到南美洲的0.648不等。中性检验表明,在美洲、北美洲和亚洲的大陆层面以及这些地区内的一些国家存在种群扩张。相比之下,在全球和大陆层面(南美洲、大洋洲和非洲)以及这些大陆内的大多数国家,观察到中性种群。分子方差分析(AMOVA)揭示了国家之间及国家内部的遗传结构,但未观察到遗传隔离(FST = 0.03144;P > 0.05)。尽管亚洲种群的遗传多样性较低,但它们促进了与其他大陆的基因流动,这表明该物种可能起源于亚洲本土。这种蚊子扩散到新的地区,再加上其传播各种虫媒病毒的能力,凸显了它作为潜在公共卫生威胁的重要性。

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