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空间转录组学在泌尿生殖系统癌症中的当前作用及未来前沿

Current Role and Future Frontiers of Spatial Transcriptomics in Genitourinary Cancers.

作者信息

Hatoum Firas, Fazili Adnan, Miller Justin W, Wang Xuefeng, Yu Xiaoqing, Lu Xin, S Johnson Jeffrey, Spiess Philippe E, Chahoud Jad

机构信息

Department of Genitourinary Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL 33612, USA.

USF Health Morsani College of Medicine, Tampa, FL 33602, USA.

出版信息

Cancers (Basel). 2025 Aug 26;17(17):2774. doi: 10.3390/cancers17172774.

DOI:10.3390/cancers17172774
PMID:40940870
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12427188/
Abstract

Malignant genitourinary tumors have demonstrated a rising incidence and are characterized by significant morbidity and mortality. Advances in sequencing technologies have greatly enhanced our understanding of the genetic and molecular mechanisms that drive tumor biology. In recent years, spatial transcriptomics technologies have rapidly evolved, enabling precise quantification and visualization of gene expression within the spatial context of tissues. Unlike conventional transcriptomics, which focuses on gene expression levels, spatial transcriptomics provides additional insights into the spatial distribution of genes within tissues, cellular composition, and cell-to-cell interactions within biological samples. In this narrative review, we outline the emerging role and future potential of spatial transcriptomics technology in genitourinary cancers.

摘要

恶性泌尿生殖系统肿瘤的发病率呈上升趋势,且具有较高的发病率和死亡率。测序技术的进步极大地增进了我们对驱动肿瘤生物学的遗传和分子机制的理解。近年来,空间转录组学技术迅速发展,能够在组织的空间背景下对基因表达进行精确量化和可视化。与专注于基因表达水平的传统转录组学不同,空间转录组学为组织内基因的空间分布、细胞组成以及生物样本内细胞间相互作用提供了更多见解。在这篇综述中,我们概述了空间转录组学技术在泌尿生殖系统癌症中的新兴作用和未来潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/9dbdb6559142/cancers-17-02774-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/24ccaa6506ac/cancers-17-02774-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/fe103f590e66/cancers-17-02774-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/f75500b6aeb7/cancers-17-02774-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/9dbdb6559142/cancers-17-02774-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/24ccaa6506ac/cancers-17-02774-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/fe103f590e66/cancers-17-02774-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/f75500b6aeb7/cancers-17-02774-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d3b/12427188/9dbdb6559142/cancers-17-02774-g004.jpg

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本文引用的文献

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Spatial transcriptomics mapping of immune cell and TGFβ signalling pathway heterogeneity in testicular germ cell tumours.睾丸生殖细胞肿瘤中免疫细胞和TGFβ信号通路异质性的空间转录组学图谱
Andrology. 2025 Jul 22. doi: 10.1111/andr.70100.
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From tissue architecture to clinical insights: Spatial transcriptomics in solid tumor studies.从组织结构到临床见解:实体瘤研究中的空间转录组学
Semin Oncol. 2025 Jul 14;52(5):152389. doi: 10.1016/j.seminoncol.2025.152389.
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Spatial Omics in Clinical Research: A Comprehensive Review of Technologies and Guidelines for Applications.
临床研究中的空间组学:技术与应用指南综述
Int J Mol Sci. 2025 Apr 22;26(9):3949. doi: 10.3390/ijms26093949.
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Rigor and Reproducibility of Spatial Transcriptomics Performed on Clinically Sourced Human Tissues.对临床来源的人体组织进行空间转录组学研究的严谨性和可重复性。
Lab Invest. 2025 Apr 29;105(9):104190. doi: 10.1016/j.labinv.2025.104190.
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Immunotherapy in Prostate Cancer: From a "Cold" Tumor to a "Hot" Prospect.前列腺癌的免疫疗法:从“冷”肿瘤到“热”前景
Cancers (Basel). 2025 Mar 21;17(7):1064. doi: 10.3390/cancers17071064.
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Benchmarking spatial transcriptomics technologies with the multi-sample SpatialBenchVisium dataset.使用多样本空间基准数据集SpatialBenchVisium对空间转录组学技术进行基准测试。
Genome Biol. 2025 Mar 28;26(1):77. doi: 10.1186/s13059-025-03543-4.
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Spatial relationships and interactions of immune cell niches are linked to the pathologic response of muscle-invasive bladder cancer to neoadjuvant therapy.免疫细胞龛的空间关系和相互作用与肌层浸润性膀胱癌对新辅助治疗的病理反应相关。
J Transl Med. 2025 Mar 27;23(1):375. doi: 10.1186/s12967-025-06358-w.
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Progressive T cell exhaustion and predominance of aging tissue associated macrophages with advancing disease stage in penile squamous cell carcinoma.在阴茎鳞状细胞癌中,随着疾病进展,T细胞逐渐耗竭,衰老组织相关巨噬细胞占主导地位。
Sci Rep. 2025 Mar 5;15(1):7703. doi: 10.1038/s41598-025-89760-0.
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Advancements in single-cell RNA sequencing and spatial transcriptomics: transforming biomedical research.单细胞RNA测序和空间转录组学的进展:变革生物医学研究
Acta Biochim Pol. 2025 Feb 5;72:13922. doi: 10.3389/abp.2025.13922. eCollection 2025.
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