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相分离调控真菌生长、有性发育、适应性及合成生物学应用

Phase Separation-Regulated Fungal Growth, Sexual Development, Adaptation and Synthetic Biology Applications.

作者信息

Tong Xinxin, Zhang Daixi, Zhu Zhenhong

机构信息

The Ministry of Education Key Laboratory of Standardization of Chinese Medicine, Key Laboratory of Systematic Research of Distinctive Chinese Medicine Resources in Southwest China, Resources Breeding Base of Co-Founded, School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.

School of Life Science, Zhejiang Chinese Medical University, Hangzhou 310053, China.

出版信息

J Fungi (Basel). 2025 Sep 17;11(9):680. doi: 10.3390/jof11090680.

DOI:10.3390/jof11090680
PMID:41003226
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12470725/
Abstract

Liquid-liquid phase separation (LLPS) is a fundamental biophysical process in which proteins and nucleic acids dynamically demix from the cellular milieu to form membraneless organelles (MLO) with liquid-like properties. Environmental cues, such as light, temperature fluctuations, and pathogen interactions, induce LLPS of fungal proteins with intrinsically disordered regions (IDRs) or multimerization domains, thereby regulating fungal hyphal growth, sexual reproduction, pathogenesis, and adaptation. Recently, LLPS has emerged as a powerful tool for biomolecular research, innovative biotechnological application, biosynthesis and metabolic engineering. This review focuses on the current advances in environmental cue-triggered fungal condensates assembled by LLPS, with a focus on their roles in regulating the fungal physical biology and cellular processes including transcription, RNA modification, translation, posttranslational modification process (PTM), transport, and stress response. It further discusses the strategies of engineering synthetic biomolecular condensates in microbial cell factories to enhance production and metabolic efficiency.

摘要

液-液相分离(LLPS)是一种基本的生物物理过程,其中蛋白质和核酸从细胞环境中动态分离,形成具有液体样性质的无膜细胞器(MLO)。环境线索,如光、温度波动和病原体相互作用,会诱导具有内在无序区域(IDR)或多聚化结构域的真菌蛋白质发生LLPS,从而调节真菌菌丝生长、有性生殖、致病性和适应性。最近,LLPS已成为生物分子研究、创新生物技术应用、生物合成和代谢工程的有力工具。本综述重点关注由LLPS组装的环境线索触发的真菌凝聚物的当前进展,重点关注它们在调节真菌物理生物学和细胞过程(包括转录、RNA修饰、翻译、翻译后修饰过程(PTM)、运输和应激反应)中的作用。它还讨论了在微生物细胞工厂中工程化合成生物分子凝聚物以提高生产和代谢效率的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/0416a1414cb6/jof-11-00680-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/68de8881bd14/jof-11-00680-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/4af77095f291/jof-11-00680-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/f1ca2ec85ef5/jof-11-00680-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/a0c653c1d8a3/jof-11-00680-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/2f1e85544bb9/jof-11-00680-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/0416a1414cb6/jof-11-00680-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/68de8881bd14/jof-11-00680-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/4af77095f291/jof-11-00680-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/f1ca2ec85ef5/jof-11-00680-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/a0c653c1d8a3/jof-11-00680-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/2f1e85544bb9/jof-11-00680-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9be8/12470725/0416a1414cb6/jof-11-00680-g006.jpg

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本文引用的文献

1
HP1 loses its chromatin clustering and phase separation function across evolution.在整个进化过程中,异染色质蛋白1失去了其染色质聚集和相分离功能。
Nat Commun. 2025 Jul 10;16(1):6375. doi: 10.1038/s41467-025-61749-3.
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Controlling Release Kinetics of an Adjuvant from a Depot Improves the Efficacy of Local Immunotherapy in Metastatic Cancer.控制来自贮库的佐剂的释放动力学可提高转移性癌症局部免疫治疗的疗效。
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Biomolecule-Based Coacervation: Mechanisms, Applications, and Future Perspectives in Biomedical and Biotechnological Fields.
基于生物分子的凝聚:生物医学和生物技术领域的机制、应用及未来展望
Biomolecules. 2025 Jun 13;15(6):861. doi: 10.3390/biom15060861.
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PEX14 condensates recruit receptor and cargo pairs for peroxisomal protein import.PEX14凝聚物募集受体和货物对用于过氧化物酶体蛋白导入。
Nat Struct Mol Biol. 2025 Jun 24. doi: 10.1038/s41594-025-01601-w.
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Liquid-liquid phase separation of DDX3X: mechanisms, pathological implications, and therapeutic potential.
Int J Biol Macromol. 2025 Jun;317(Pt 1):144835. doi: 10.1016/j.ijbiomac.2025.144835. Epub 2025 May 31.
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Liquid-liquid phase separation of membrane-less condensates: from biogenesis to function.无膜凝聚物的液-液相分离:从生物发生到功能
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MambaPhase: deep learning for liquid-liquid phase separation protein classification.曼巴阶段:用于液-液相分离蛋白分类的深度学习
Brief Bioinform. 2025 May 3;26(3). doi: 10.1093/bib/bbaf230.
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Sequence-based prediction of intermolecular interactions driven by disordered regions.基于序列的由无序区域驱动的分子间相互作用预测
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Emerging connections: Poly(ADP-ribose), FET proteins and RNA in the regulation of DNA damage condensates.新出现的联系:聚(ADP - 核糖)、FET蛋白和RNA在DNA损伤凝聚物调控中的作用
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The phase-separating Magnaporthe oryzae MoSpa2 complex organizes actin nucleation centers for plant infection.具有相分离特性的稻瘟病菌MoSpa2复合物为植物侵染组建肌动蛋白成核中心。
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