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碱性胰蛋白酶抑制剂中脂肪族质子的构象依赖性核磁共振化学位移中的环电流效应

Ring current effects in the conformation dependent NMR chemical shifts of aliphatic protons in the basic pancreatic trypsin inhibitor.

作者信息

Perkins S J, Wüthrich K

出版信息

Biochim Biophys Acta. 1979 Feb 26;576(2):409-23. doi: 10.1016/0005-2795(79)90416-1.

Abstract

Previously, a highly refined crystal structure and energy refined atomic coordinates were obtained for the basic pancreatic trypsin inhibitor, as well as numerous individual resonance assignments in the 1H NMR spectrum. These data were now used to investigate the contributions from the local ring current fields of the aromatic rings to the overall conformation dependent chemical shifts in this globular protein. A program was written which allowed the consideration of certain aspects of internal mobility of the protein, and the different commonly used ring current equa tions were compared. These studies indicate that ring current shifts are the dominant contribution to the observed conformation dependent chemical shifts of the peripheral aliphatic side chain protons. On the other hand, it appears that ring current shifts do not make dominant contributions to the conformation dependent shifts of the backbone alpha- and amide protons or the aromatic protons in the inhibitor. On the basis of the empirical calibration with the peripheral aliphatic side chain protons, the Johnson-Bovey ring current equation was selected for an analysis of the ring geometries of two prolines in the inhibitor.

摘要

此前,已获得了基本胰蛋白酶抑制剂的高度精细晶体结构和能量精修的原子坐标,以及1H NMR谱中的众多单个共振归属。现在利用这些数据来研究芳香环的局部环电流场对该球状蛋白中整体构象依赖性化学位移的贡献。编写了一个程序,该程序允许考虑蛋白质内部流动性的某些方面,并比较了不同常用的环电流方程。这些研究表明,环电流位移是观察到的外周脂肪族侧链质子构象依赖性化学位移的主要贡献因素。另一方面,环电流位移似乎对抑制剂中主链α-质子和酰胺质子或芳香质子的构象依赖性位移没有主要贡献。基于与外周脂肪族侧链质子的经验校准,选择了约翰逊-博维环电流方程来分析抑制剂中两个脯氨酸的环几何结构。

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