关于16S核糖体核糖核酸中转录后修饰核苷酸的观察
Observations on the post-transcriptionally modified nucleotides in the 16S ribosomal ribonucleic acid.
作者信息
Sogin M L, Pechman K J, Zablen L, Lewis B J, Woese C R
出版信息
J Bacteriol. 1972 Oct;112(1):13-6. doi: 10.1128/jb.112.1.13-16.1972.
Abstract
The 16S (18S) ribosomal ribonucleic acids from a number of organisms were screened for the presence of (some of) the post-transcriptionally modified oligomers found in Escherichia coli 16S ribosomal ribonucleic acid. All prokaryotic 16S species contained all of the modified oligomers tested, with the sole exception that one such oligomer was missing in Alcaligenes faecalis. The post-transcriptional modifications in all of these oligomers except one appear to occur at the later stagesin ribosomal maturation.
摘要
对多种生物的16S（18S）核糖体核糖核酸进行了筛查，以检测是否存在大肠杆菌16S核糖体核糖核酸中发现的（部分）转录后修饰的寡聚物。所有原核生物的16S种类都含有所有测试的修饰寡聚物，唯一的例外是粪产碱菌中缺少一种这样的寡聚物。除一种寡聚物外，所有这些寡聚物的转录后修饰似乎都发生在核糖体成熟的后期阶段。
相似文献
1
Observations on the post-transcriptionally modified nucleotides in the 16S ribosomal ribonucleic acid.关于16S核糖体核糖核酸中转录后修饰核苷酸的观察
J Bacteriol. 1972 Oct;112(1):13-6. doi: 10.1128/jb.112.1.13-16.1972.
2
Partial nucleotide sequence of 16S ribosomal RNA from E. coli.大肠杆菌16S核糖体RNA的部分核苷酸序列。
Nat New Biol. 1972 Sep 6;239(88):1-5.
3
CONSERVATION OF RIBOSOMAL AND MESSENGER RIBONUCLEIC ACID CISTRONS IN BACILLUS SPECIES.芽孢杆菌属中核糖体核糖核酸和顺反子信使核糖核酸的保守性
J Bacteriol. 1965 Aug;90(2):384-90. doi: 10.1128/jb.90.2.384-390.1965.
4
Characterization of the primary structural homology between the 16s ribosomal RNAs of Escherichia coli and Bacillus megaterium by oligomer cataloging.通过寡聚物编目对大肠杆菌和巨大芽孢杆菌16S核糖体RNA之间一级结构同源性的表征。
J Mol Evol. 1972;1(3):230-40. doi: 10.1007/BF01660242.
5
Ribonucleic acid synthesis in bacteria treated with toluene.用甲苯处理的细菌中的核糖核酸合成
J Bacteriol. 1971 Aug;107(2):585-8. doi: 10.1128/jb.107.2.585-588.1971.
6
Additional nucleotide sequences in precursor 16S ribosomal RNA from Escherichia coli.来自大肠杆菌的前体16S核糖体RNA中的额外核苷酸序列。
Nat New Biol. 1971 Jul 14;232(28):54-5. doi: 10.1038/newbio232054a0.
7
Sequence studies on precursor 16S ribosomal RNA of Escherichia coli.大肠杆菌16S核糖体RNA前体的序列研究
Nat New Biol. 1971 Jul 14;232(28):50-2. doi: 10.1038/newbio232050a0.
8
Comparative studies on bacterial 5S ribosomal RNA.细菌5S核糖体RNA的比较研究。
Arch Biochem Biophys. 1973 May;156(1):104-11. doi: 10.1016/0003-9861(73)90346-9.
9
Terminal-sequence analysis of bacterial ribosomal RNA. Correlation between the 3'-terminal-polypyrimidine sequence of 16-S RNA and translational specificity of the ribosome.细菌核糖体RNA的末端序列分析。16-S RNA的3'-末端多嘧啶序列与核糖体翻译特异性之间的相关性。
Eur J Biochem. 1975 Sep 1;57(1):221-30. doi: 10.1111/j.1432-1033.1975.tb02294.x.
10
Characterization of the 5' and 3' ends of the 16S ribonucleic acid from T 1 -ribonuclease treated 30S ribosomes.来自经T1核糖核酸酶处理的30S核糖体的16S核糖核酸5'端和3'端的表征
Biochemistry. 1972 Feb 29;11(5):786-91. doi: 10.1021/bi00755a017.
引用本文的文献
1
Classification of methanogenic bacteria by 16S ribosomal RNA characterization.通过16S核糖体RNA特征对产甲烷菌进行分类。
Proc Natl Acad Sci U S A. 1977 Oct;74(10):4537-41. doi: 10.1073/pnas.74.10.4537.
2
Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes.通过扩增rRNA基因限制性分析和16S rRNA基因序列分析确定海水中表面的细菌初级定殖和早期演替。
Appl Environ Microbiol. 2000 Feb;66(2):467-75. doi: 10.1128/AEM.66.2.467-475.2000.
3
Genetic diversity of the biofilm covering Montacuta ferruginosa (Mollusca, bivalvia) as evaluated by denaturing gradient gel electrophoresis analysis and cloning of PCR-amplified gene fragments coding for 16S rRNA.通过变性梯度凝胶电泳分析以及对编码16S rRNA的PCR扩增基因片段进行克隆，评估覆盖铁锈色蒙特卡塔蛤（软体动物，双壳纲）的生物膜的遗传多样性。
Appl Environ Microbiol. 1998 Sep;64(9):3464-72. doi: 10.1128/AEM.64.9.3464-3472.1998.
4
Sequence, modified nucleotides and secondary structure at the 3'-end of small ribosomal subunit RNA.小核糖体亚基RNA 3'端的序列、修饰核苷酸和二级结构
Nucleic Acids Res. 1982 Feb 25;10(4):1149-58. doi: 10.1093/nar/10.4.1149.
5
The relationship between precursor and mature forms of the 23S ribosomal RNA.23S核糖体RNA前体与成熟形式之间的关系。
J Mol Evol. 1973;2(2-3):167-74. doi: 10.1007/BF01653996.
6
Structure and synthesis of the ribosomal ribonucleic acid of prokaryotes.原核生物核糖体核糖核酸的结构与合成
Bacteriol Rev. 1973 Dec;37(4):562-603. doi: 10.1128/br.37.4.562-603.1973.
7
The concept of cellular evolution.
J Mol Evol. 1977 Sep 20;10(1):1-6. doi: 10.1007/BF01796132.
8
Procaryote phylogeny IV: concerning the phylogenetic status of a photosynthetic bacterium.
J Mol Evol. 1975 Jun 9;5(1):25-34. doi: 10.1007/BF01732011.
9
Transcription of Escherichia coli ribosomal DNA in Proteus mirabilis.
Mol Gen Genet. 1976 Aug 19;147(2):179-88. doi: 10.1007/BF00267569.
10
Are extreme halophiles actually "bacteria"?极端嗜盐菌真的是“细菌”吗？
J Mol Evol. 1978 May 12;11(1):1-8. doi: 10.1007/BF01768019.
本文引用的文献
1
A requirement for sodium in the growth of Rhodopseudomonas spheroides.球形红假单胞菌生长对钠的需求。
J Gen Microbiol. 1960 Jun;22:778-85. doi: 10.1099/00221287-22-3-778.
2
Construction of phylogenetic trees.系统发育树的构建。
Science. 1967 Jan 20;155(3760):279-84. doi: 10.1126/science.155.3760.279.
3
A two-dimensional fractionation procedure for radioactive nucleotides.一种用于放射性核苷酸的二维分级分离程序。
J Mol Biol. 1965 Sep;13(2):373-98. doi: 10.1016/s0022-2836(65)80104-8.
4
Detection of precursor 16 s ribosomal RNA in the polysome fraction of Escherichia coli.在大肠杆菌多核糖体组分中前体16 s核糖体RNA的检测。
J Mol Biol. 1971 Nov 14;61(3):739-44. doi: 10.1016/0022-2836(71)90077-5.
5
Role modifications in tyrosine transfer RNA: a modified base affecting ribosome binding.酪氨酸转运核糖核酸中的碱基修饰：一种影响核糖体结合的修饰碱基。
J Mol Biol. 1969 Jan 14;39(1):145-57. doi: 10.1016/0022-2836(69)90339-8.
6
Additional nucleotide sequences in precursor 16S ribosomal RNA from Escherichia coli.来自大肠杆菌的前体16S核糖体RNA中的额外核苷酸序列。
Nat New Biol. 1971 Jul 14;232(28):54-5. doi: 10.1038/newbio232054a0.
7
Structural differences between the 16S ribosomal RNA of E. coli and its precursor.大肠杆菌16S核糖体RNA与其前体之间的结构差异。
Nat New Biol. 1971 Jul 14;232(28):52-4. doi: 10.1038/newbio232052a0.
8
Primary structural relationship of p16 to m16 ribosomal RNA.p16与m16核糖体RNA的一级结构关系。
Nat New Biol. 1971 Jul 14;232(28):48-9. doi: 10.1038/newbio232048a0.
9
Isolation of mutants of Escherichia coli lac king 5-methyluracil in transfer ribonucleic acid or 1-methylguanine in ribosomal RNA.分离大肠杆菌转移核糖核酸中缺乏5-甲基尿嘧啶或核糖体核糖核酸中缺乏1-甲基鸟嘌呤的突变体。
J Mol Biol. 1970 Jul 14;51(1):83-100. doi: 10.1016/0022-2836(70)90272-x.
10
Formation of all stable RNA species in Escherichia coli by posttranscriptional modification.大肠杆菌中所有稳定RNA种类通过转录后修饰形成。
Proc Natl Acad Sci U S A. 1970 Apr;65(4):1097-104. doi: 10.1073/pnas.65.4.1097.
Zotero 插件