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烟酰胺腺嘌呤二核苷酸连接的脱氢酶在二核苷酸固定化衍生物上的亲和层析

Affinity chromatography of nicotinamide-adenine dinucleotide-linked dehydrogenases on immobilized derivatives of the dinucleotide.

作者信息

Barry S, O'Carra P

出版信息

Biochem J. 1973 Dec;135(4):595-607. doi: 10.1042/bj1350595.

DOI:10.1042/bj1350595
PMID:4360246
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1165874/
Abstract
  1. Three established methods for immobilization of ligands through primary amino groups promoted little or no attachment of NAD(+) through the 6-amino group of the adenine residue. Two of these methods (coupling to CNBr-activated agarose and to carbodi-imide-activated carboxylated agarose derivatives) resulted instead in attachment predominantly through the ribosyl residues. Other immobilized derivatives were prepared by azolinkage of NAD(+) (probably through the 8 position of the adenine residue) to a number of different spacer-arm-agarose derivatives. 2. The effectiveness of these derivatives in the affinity chromatography of a variety of NAD-linked dehydrogenases was investigated, applying rigorous criteria to distinguish general or non-specific adsorption effects from truly NAD-specific affinity (bio-affinity). The ribosyl-attached NAD(+) derivatives displayed negligible bio-affinity for any of the NAD-linked dehydrogenases tested. The most effective azo-linked derivative displayed strong bio-affinity for glycer-aldehyde 3-phosphate dehydrogenase, weaker bio-affinity for lactate dehydrogenase and none at all for malate dehydrogenase, although these three enzymes have very similar affinities for soluble NAD(+). Alcohol dehydrogenase and xanthine dehydrogenase were subject to such strong non-specific interactions with the hydrocarbon spacer-arm assembly that any specific affinity was completely eclipsed. 3. It is concluded that, in practice, the general effectiveness of a general ligand may be considerably distorted and attenuated by the nature of the immobilization linkage. However, this attenuation can result in an increase in specific effectiveness, allowing dehydrogenases to be separated from one another in a manner unlikely to be feasible if the general effectiveness of the ligand remained intact. 4. The bio-affinity of the various derivatives for lactate dehydrogenase is correlated with the known structure of the NAD(+)-binding site of this enzyme. Problems associated with the use of immobilized derivatives for enzyme binding and mechanistic studies are briefly discussed.
摘要
  1. 三种通过伯氨基固定配体的既定方法几乎没有促进或完全没有促进NAD⁺通过腺嘌呤残基的6-氨基进行附着。其中两种方法(与溴化氰活化的琼脂糖以及与碳二亚胺活化的羧化琼脂糖衍生物偶联)反而主要导致通过核糖基残基进行附着。其他固定化衍生物是通过将NAD⁺(可能通过腺嘌呤残基的8位)通过偶氮键连接到多种不同的间隔臂-琼脂糖衍生物上制备的。2. 研究了这些衍生物在多种NAD连接的脱氢酶的亲和色谱中的有效性,应用严格的标准来区分一般或非特异性吸附效应与真正的NAD特异性亲和力(生物亲和力)。核糖基连接的NAD⁺衍生物对所测试的任何NAD连接的脱氢酶显示出可忽略不计的生物亲和力。最有效的偶氮连接衍生物对甘油醛-3-磷酸脱氢酶显示出强生物亲和力,对乳酸脱氢酶显示出较弱的生物亲和力,而对苹果酸脱氢酶则完全没有生物亲和力,尽管这三种酶对可溶性NAD⁺具有非常相似的亲和力。乙醇脱氢酶和黄嘌呤脱氢酶与烃间隔臂组件发生如此强烈的非特异性相互作用,以至于任何特异性亲和力都完全被掩盖。3. 得出的结论是,在实践中,一般配体的总体有效性可能会因固定连接的性质而被极大地扭曲和减弱。然而,这种减弱可能会导致特异性有效性的增加,使得脱氢酶能够以一种如果配体的总体有效性保持不变则不太可能可行的方式彼此分离。4. 各种衍生物对乳酸脱氢酶的生物亲和力与该酶的NAD⁺结合位点的已知结构相关。简要讨论了使用固定化衍生物进行酶结合和机理研究时相关的问题。

相似文献

1
Affinity chromatography of nicotinamide-adenine dinucleotide-linked dehydrogenases on immobilized derivatives of the dinucleotide.烟酰胺腺嘌呤二核苷酸连接的脱氢酶在二核苷酸固定化衍生物上的亲和层析
Biochem J. 1973 Dec;135(4):595-607. doi: 10.1042/bj1350595.
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General ligands in affinity chromatography. Cofactor-substrate elution of enzymes bound to the immobilized nucleotides adenosine 5'-monophosphate and nicotinamide-adenine dinucleotide.亲和色谱中的通用配体。固定化核苷酸5'-单磷酸腺苷和烟酰胺腺嘌呤二核苷酸结合的酶的辅因子-底物洗脱。
Biochem J. 1972 May;127(4):625-31. doi: 10.1042/bj1270625.
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Affinity chromatography of nicotinamide nucleotide-dependent dehydrogenases on immobilized nucleotide derivatives.固定化核苷酸衍生物上烟酰胺核苷酸依赖性脱氢酶的亲和层析
Biochem J. 1974 Sep;141(3):775-87. doi: 10.1042/bj1410775.
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Synthesis of a highly substituted N(6)-linked immobilized NAD(+) derivative using a rapid solid-phase modular approach: suitability for use with the kinetic locking-on tactic for bioaffinity purification of NAD(+)-dependent dehydrogenases.使用快速固相模块化方法合成高度取代的N(6)-连接固定化NAD(+)衍生物:适用于与动力学锁定策略一起用于NAD(+)依赖性脱氢酶的生物亲和纯化。
Protein Expr Purif. 2000 Dec;20(3):421-34. doi: 10.1006/prep.2000.1314.
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Double-ternary complex affinity chromatography: preparation of alcohol dehydrogenases.
Biochemistry. 1976 Oct 19;15(21):4681-6. doi: 10.1021/bi00666a022.
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Role of adenine ring and adenine ribose of nicotinamide adenine dinucleotide in binding and catalysis with alcohol, lactate, and glyceraldehyde-3-phosphate dehydrogenases.烟酰胺腺嘌呤二核苷酸的腺嘌呤环和腺嘌呤核糖在与乙醇、乳酸和3-磷酸甘油醛脱氢酶结合及催化过程中的作用
J Biol Chem. 1977 Jun 25;252(12):4125-33.
7
Use of differently immobilized nucleotides for binding NAD+-dependent dehydrogenases.使用不同固定化核苷酸结合NAD+依赖性脱氢酶。
Methods Enzymol. 1980;66:192-208. doi: 10.1016/0076-6879(80)66459-3.
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Evidence for binding of NAD dimers to NAD-dependent dehydrogenases.NAD二聚体与NAD依赖型脱氢酶结合的证据。
Biochim Biophys Acta. 1981 Sep 15;661(1):120-3. doi: 10.1016/0005-2744(81)90090-5.
9
Purification of nicotinamide-adenine dinucleotide-dependent dehydrogenases by affinity chromatography.通过亲和色谱法纯化烟酰胺腺嘌呤二核苷酸依赖性脱氢酶。
Biochem J. 1971 Nov;125(2):20P-21P. doi: 10.1042/bj1250020p.
10
Purification and separation of pyridine nucleotide-linked dehydrogenases by affinity chromatography techniques.通过亲和色谱技术纯化和分离吡啶核苷酸连接的脱氢酶。
Proc Natl Acad Sci U S A. 1974 Sep;71(9):3450-4. doi: 10.1073/pnas.71.9.3450.

引用本文的文献

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Biochem J. 1982 Aug 1;205(2):257-63. doi: 10.1042/bj2050257.
2
The study of ligand-protein interactions utilizing affinity chromatography.利用亲和色谱法研究配体-蛋白质相互作用。
Appl Biochem Biotechnol. 1984 Jun;9(3):261-84. doi: 10.1007/BF02798492.
3
Affinity chromatography of nicotinamide nucleotide-dependent dehydrogenases on immobilized nucleotide derivatives.固定化核苷酸衍生物上烟酰胺核苷酸依赖性脱氢酶的亲和层析
Biochem J. 1974 Sep;141(3):775-87. doi: 10.1042/bj1410775.
4
Purification of avian myeloblastosis virus DNA polymerase by affinity chromatography on polycytidylate-agarose.通过在聚胞苷酸-琼脂糖上进行亲和层析纯化禽成髓细胞瘤病毒DNA聚合酶。
J Virol. 1974 Oct;14(4):853-9. doi: 10.1128/JVI.14.4.853-859.1974.
5
Studies on the use of sepharose-N-(6-aminohexanoyl)-2-amino-2-deoxy-D-glucopyranose for the large-scale purification of hepatic glucokinase.关于使用琼脂糖-N-(6-氨基己酰基)-2-氨基-2-脱氧-D-吡喃葡萄糖进行大规模纯化肝葡萄糖激酶的研究。
Biochem J. 1976 Feb 1;153(2):351-61. doi: 10.1042/bj1530351.
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A steady-state kinetic study of the reaction catalysed by the secondary-amine mono-oxygenase of Pseudomonas aminovorans.食氨基假单胞菌仲胺单加氧酶催化反应的稳态动力学研究。
Biochem J. 1976 Jul 1;157(1):197-205. doi: 10.1042/bj1570197.
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Biospecific-elution chromatography with 'imphilytes' as stationary phases.以“两性电解质”为固定相的生物特异性洗脱色谱法。
Biochem J. 1977 Feb 1;161(2):233-7. doi: 10.1042/bj1610233.
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Affinity chromatography of bacterial lactate dehydrogenases.细菌乳酸脱氢酶的亲和层析
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Affinity chromatography of aminoacyl-transfer ribonucleic acid synthetases. Small organic ligands.氨酰转移核糖核酸合成酶的亲和层析。小分子有机配体。
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Purification of the hexokinases by affinity chromatography on sepharose-N-aminoacylglucosamine derivates. Design of affinity matrices from free solution kinetics.通过在琼脂糖-N-氨酰葡糖衍生物上进行亲和层析纯化己糖激酶。基于自由溶液动力学设计亲和基质。
Biochem J. 1978 Oct 1;175(1):125-35. doi: 10.1042/bj1750125.

本文引用的文献

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Studies on the mechanism of action of isocitric dehydrogenase.异柠檬酸脱氢酶作用机制的研究。
J Biol Chem. 1960 Apr;235:928-33.
2
THE ACYL-ENZYME INTERMEDIATE AND THE KINETIC MECHANISM OF THE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE REACTION.甘油醛-3-磷酸脱氢酶反应的酰基-酶中间体及动力学机制
J Biol Chem. 1965 Feb;240:844-55.
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Properties of the two forms of malic dehydrogenase from beef heart.来自牛心的两种形式苹果酸脱氢酶的特性。
J Biol Chem. 1961 Jul;236:1980-5.
4
Affinity chromatography of enzymes on an AMP-analogue: Specific elution of dehydrogenases from a general ligand.在一种AMP类似物上对酶进行亲和层析:从通用配体中特异性洗脱脱氢酶。
FEBS Lett. 1972 Sep 15;25(2):234-238. doi: 10.1016/0014-5793(72)80492-7.
5
Affinity chromatography of lactate dehydrogenase Model studies demonstrating the potential of the technique in the mechanistic investigation as well as in the purification of multi-substrate enzymes.乳酸脱氢酶的亲和色谱法:模型研究证明了该技术在机理研究以及多底物酶纯化方面的潜力。
FEBS Lett. 1972 Apr 1;21(3):281-285. doi: 10.1016/0014-5793(72)80183-2.
6
Affinity gel filtration: A new method for the rapid determination of apparent molecular weights of enzymes.亲和凝胶过滤:一种快速测定酶表观分子量的新方法。
FEBS Lett. 1971 Oct 15;18(1):31-34. doi: 10.1016/0014-5793(71)80399-x.
7
Affinity chromatography of enzymes on insolubilized cofactors.
FEBS Lett. 1971 May 20;14(5):313-316. doi: 10.1016/0014-5793(71)80288-0.
8
The purification of beta-galactosidase from Escherichia coli by affinity chromatography.通过亲和色谱法从大肠杆菌中纯化β-半乳糖苷酶。
J Biol Chem. 1971 Jan 10;246(1):196-200.
9
Comparative study of methods for quantitation of lactate dehydrogenase isozymes.
Anal Biochem. 1970 Aug;36(2):443-53. doi: 10.1016/0003-2697(70)90381-7.
10
Protein purification by affinity chromatography. Derivatizations of agarose and polyacrylamide beads.通过亲和色谱法进行蛋白质纯化。琼脂糖和聚丙烯酰胺珠粒的衍生化。
J Biol Chem. 1970 Jun;245(12):3059-65.