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1
Anisotropic flexibility of DNA and the nucleosomal structure.DNA的各向异性柔韧性与核小体结构
Nucleic Acids Res. 1979 Mar;6(3):1081-96. doi: 10.1093/nar/6.3.1081.
2
[Anisotropic flexibility of DNA depends on the base sequence. Conformation calculations of double-stranded tetranucleotides AAAA:TTTT, (AATT)2, (TTAA)2, GGGG:CCCC, (GGCC)2, (CCGG)2].DNA的各向异性柔韧性取决于碱基序列。双链四核苷酸AAAA:TTTT、(AATT)2、(TTAA)2、GGGG:CCCC、(GGCC)2、(CCGG)2的构象计算
Mol Biol (Mosk). 1984 Nov-Dec;18(6):1664-85.
3
Sequence-dependent anisotropic flexibility of B-DNA. A conformational study.B-DNA的序列依赖性各向异性柔性。一项构象研究。
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4
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5
[Local mobility of the DNA double helix. Comparison of conformational analysis with experiments].[DNA双螺旋的局部流动性。构象分析与实验的比较]
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6
A random-walk model for helix bending in B-DNA.B-DNA中螺旋弯曲的随机游走模型。
Proc Natl Acad Sci U S A. 1983 Dec;80(23):7099-103. doi: 10.1073/pnas.80.23.7099.
7
Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes.DNA寡核苷酸和DNA-蛋白质复合物晶体结构中局部螺旋弯曲的分析。
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9
Superhelicity of nucleosomal DNA changes its double-helical repeat.核小体DNA的超螺旋性改变了其双螺旋重复序列。
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10
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J Biomol Struct Dyn. 1998 Apr;15(5):823-39. doi: 10.1080/07391102.1998.10508205.

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Topological diversity of chromatin fibers: Interplay between nucleosome repeat length, DNA linking number and the level of transcription.染色质纤维的拓扑多样性:核小体重复长度、DNA连接数与转录水平之间的相互作用。
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10
Interplay of protein and DNA structure revealed in simulations of the lac operon.蛋白质和 DNA 结构的相互作用在 lac 操纵子模拟中得以揭示。
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The flexibility of low molecular weight double-stranded DNA as a function of length. I. Light scattering measurements and the estimation of persistence lengths from light scattering, sedimentation and viscosity.低分子量双链DNA的柔韧性与长度的关系。I. 光散射测量以及通过光散射、沉降和粘度估算持久长度
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DNA的各向异性柔韧性与核小体结构

Anisotropic flexibility of DNA and the nucleosomal structure.

作者信息

Zhurkin V B, Lysov Y P, Ivanov V I

出版信息

Nucleic Acids Res. 1979 Mar;6(3):1081-96. doi: 10.1093/nar/6.3.1081.

DOI:10.1093/nar/6.3.1081
PMID:440969
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC327755/
Abstract

Potential energy calculations of the DNA duplex dimeric subunit show that the double helix may be bent in the direction of minor and major grooves much more easily than in other directions. It is found that the total winding angle of DNA decreases upon such bending. A new model for DNA folding in the nucleosome is proposed on the basis of these findings according to which the DNA molecule is kinked each fifth base pair to the side of the minor and major grooves alternatively. The model explains the known contradiction between a C-like circular dichroism for the nucleosomal DNA and the nuclease digestion data, which testify to the B-form of DNA.

摘要

对DNA双链二聚体亚基的势能计算表明,双螺旋向小沟和大沟方向弯曲可能比向其他方向弯曲更容易。研究发现,DNA的总缠绕角在这种弯曲时会减小。基于这些发现,提出了一种核小体中DNA折叠的新模型,根据该模型,DNA分子每隔五个碱基对交替向小沟和大沟一侧弯折。该模型解释了核小体DNA的C类圆二色性与核酸酶消化数据之间已知的矛盾,核酸酶消化数据证明DNA为B型。