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模拟-数字分子细胞计算机

Analog-digital molecular cell computer.

作者信息

Liberman E A

出版信息

Biosystems. 1979 Aug;11(2-3):111-24. doi: 10.1016/0303-2647(79)90005-4.

Abstract

The living cell is controlled by a molecular stochastic computer of parallel-successive action. MCC may be equivalent to the universal computer. MCC operates with molecule-words (DNA, RNA, proteins) according to the programme recorded in DNA and RNA. Operations are produced by molecular devices (RNA- and DNA-polymerases, ligases, proteinases and so on). Molecular devices operating with molecule-words are recorded on molecules themselves, and they are read off by ribosomes. Therefore the programme of the reorganization of the programme itself may be recorded on the molecule-words. MCC operates with molecular words having definite addresses. The words and the operators collide by Brownian movement and combine if the molecular surface of address segment is complementary and properly oriented. It is possible to reproduce not only the programmes but also the operators of MCC. The molecular computer operates with word-molecules according to the programme, recorded in DNA, with the aim of predicting an outer situation in the next time-moment and selecting of a correct answer by synthesis of suitable proteins and other substances and also by macroscopic motion. Each step of directed calculation is needed of the consumption of minimally necessary portion of free energy and search is due to the Brownian movement without free energy loss. Cyclic nucleotides are intraneuron membrane potential controlling systems which can be described as molecular diffusional analog computers, well fitted to solve mathematical physics equations if there are high frequency generators and regulators of cyclic nucleotides sources and sinks. It is suggested that molecular proton channels in an electric field are such generators of 10(11)-10(12) Hz. Biophysics cannot use the ordinary laws of physics and must take into account the influence on the phenomena to be studied, not only of a measurement but also of a calculation process in the real device predicting the future.

摘要

活细胞由一台具有并行连续作用的分子随机计算机控制。分子控制计算机(MCC)可能等同于通用计算机。MCC根据记录在DNA和RNA中的程序,利用分子语言(DNA、RNA、蛋白质)进行操作。操作由分子装置(RNA聚合酶、DNA聚合酶、连接酶、蛋白酶等)产生。与分子语言一起运作的分子装置记录在分子自身上,并由核糖体读取。因此,程序自身重组的程序可能记录在分子语言上。MCC利用具有确定地址的分子语言进行操作。这些语言和运算符通过布朗运动相互碰撞,如果地址段的分子表面互补且方向合适,它们就会结合。不仅可以复制MCC的程序,还可以复制其运算符。分子计算机根据记录在DNA中的程序,利用单词分子进行操作,目的是预测下一个时刻的外部情况,并通过合成合适的蛋白质和其他物质以及宏观运动来选择正确答案。定向计算的每一步都需要消耗最少必要部分的自由能,搜索是由于布朗运动,且无自由能损失。环核苷酸是神经元内膜电位控制系统,可被描述为分子扩散模拟计算机,如果存在环核苷酸源和汇的高频发生器和调节器,它们非常适合求解数学物理方程。有人认为,电场中的分子质子通道就是这种频率为10(11)-10(12)Hz的发生器。生物物理学不能使用普通的物理定律,必须考虑到不仅测量,而且真实装置中预测未来的计算过程对所研究现象的影响。

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