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球状蛋白质中酰胺质子-Cα质子耦合常数3JHNα角依赖性的校准。利用3JHNα鉴定螺旋二级结构。

Calibration of the angular dependence of the amide proton-C alpha proton coupling constants, 3JHN alpha, in a globular protein. Use of 3JHN alpha for identification of helical secondary structure.

作者信息

Pardi A, Billeter M, Wüthrich K

出版信息

J Mol Biol. 1984 Dec 15;180(3):741-51. doi: 10.1016/0022-2836(84)90035-4.

Abstract

The vicinal amide proton-C alpha proton spin-spin coupling constants, JHN alpha, in the globular protein basic pancreatic trypsin inhibitor (BPTI) have been measured using phase-sensitive correlated spectroscopy at high digital resolution. In conjunction with the crystal structure of BPTI, these data were used to calibrate the correlation between 3JHN alpha and the dihedral angle phi. The resulting "BPTI curve" is 3JHN alpha = 6.4 cos2 theta - 1.4 cos theta + 1.9 (theta = [phi - 60 degrees]). It is further shown that measurement of the spin-spin couplings 3JHN alpha presents an independent, reliable method for identification of the location of helical structure in the amino acid sequence of proteins.

摘要

利用高数字分辨率的相敏相关光谱法,测定了球状蛋白碱性胰蛋白酶抑制剂(BPTI)中相邻酰胺质子-Cα质子的自旋-自旋耦合常数JHNα。结合BPTI的晶体结构,这些数据被用于校准3JHNα与二面角φ之间的相关性。得到的“BPTI曲线”为3JHNα = 6.4 cos2θ - 1.4 cosθ + 1.9(θ = [φ - 60°])。进一步表明,自旋-自旋耦合3JHNα的测量为鉴定蛋白质氨基酸序列中螺旋结构的位置提供了一种独立、可靠的方法。

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