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IS30,大肠杆菌K12的一种新插入序列。

IS30, a new insertion sequence of Escherichia coli K12.

作者信息

Caspers P, Dalrymple B, Iida S, Arber W

出版信息

Mol Gen Genet. 1984;196(1):68-73. doi: 10.1007/BF00334094.

DOI:10.1007/BF00334094
PMID:6090868
Abstract

Three independent spontaneous mutations of prophage P1 affecting the ability of the phage to reproduce vegetatively are due to the insertion of a mobile genetic element, called IS30. The same sequence is also carried in the R plasmid NR 1-Basel, but not in the parental plasmid NR 1. Southern hybridisation study indicates that the Escherichia coli K 12 chromosome carries several copies of IS30 as a normal resident. IS30 is 1.2 kb long and contains unique restriction cleavage sites for BglII, ClaI, HindIII, NciI and HincII, and it is cleaved twice by the enzymes HpaII and TaqI. The ends of IS30 are formed by 26 bp long inverted repeats with 3 bases mismatched. Upon transposition IS30 generates a duplication of only 2 bp of the target. The following observations suggest a pronounced specificity in target selection by IS30. In transposition to the phage P1 genome a single integration site was used three times independently, and in both orientations. A short region of sequence homology has been identified between the P1 and NR 1-Basel insertion sites. IS30 has mediated cointegration as well as deletion. The entire IS30 sequences were duplicated in the cointegrates between a pBR322 derivative containing IS30 and the genome of phage P1-15, and several loci on the P1-15 genome served as fusion sites, some of which were used more than once.

摘要

原噬菌体P1的三个独立自发突变影响噬菌体营养繁殖的能力,这是由于一种名为IS30的移动遗传元件的插入。R质粒NR 1 - 巴塞尔中也携带相同序列,但亲本质粒NR 1中没有。Southern杂交研究表明,大肠杆菌K 12染色体作为正常驻留成分携带多个IS30拷贝。IS30长1.2 kb,含有BglII、ClaI、HindIII、NciI和HincII的独特限制性切割位点,并且被HpaII和TaqI酶切割两次。IS30的末端由26 bp长的反向重复序列形成,有3个碱基错配。转座时,IS30仅使靶标产生2 bp的重复。以下观察结果表明IS30在靶标选择上具有明显的特异性。在转座到噬菌体P1基因组时,一个单一的整合位点被独立使用了三次,并且在两个方向上。在P1和NR 1 - 巴塞尔插入位点之间已鉴定出短的序列同源区域。IS30介导了共整合以及缺失。在含有IS30的pBR322衍生物与噬菌体P1 - 15基因组之间的共整合体中,整个IS30序列被重复,并且P1 - 15基因组上的几个位点用作融合位点,其中一些位点被多次使用。

相似文献

1
IS30, a new insertion sequence of Escherichia coli K12.IS30,大肠杆菌K12的一种新插入序列。
Mol Gen Genet. 1984;196(1):68-73. doi: 10.1007/BF00334094.
2
Characterization of in vitro constructed IS30-flanked transposons.体外构建的IS30侧翼转座子的表征
Gene. 1989;76(2):187-93. doi: 10.1016/0378-1119(89)90159-5.
3
Formation of the tandem repeat (IS30)2 and its role in IS30-mediated transpositional DNA rearrangements.串联重复序列(IS30)2的形成及其在IS30介导的转座DNA重排中的作用。
Mol Gen Genet. 1993 May;239(1-2):177-87. doi: 10.1007/BF00281616.
4
Terminal inverted repeats of insertion sequence IS30 serve as targets for transposition.插入序列IS30的末端反向重复序列作为转座的靶点。
J Bacteriol. 1997 Dec;179(23):7551-8. doi: 10.1128/jb.179.23.7551-7558.1997.
5
Mapping of insertion element IS30 in the Escherichia coli K12 chromosome.大肠杆菌K12染色体中插入元件IS30的定位
Mol Gen Genet. 1990 Jul;222(2-3):317-22. doi: 10.1007/BF00633835.
6
Target specificity of insertion element IS30.
Mol Microbiol. 1998 May;28(4):691-704. doi: 10.1046/j.1365-2958.1998.00824.x.
7
Nucleotide sequence of the prokaryotic mobile genetic element IS30.原核生物移动遗传元件IS30的核苷酸序列。
EMBO J. 1984 Sep;3(9):2145-9. doi: 10.1002/j.1460-2075.1984.tb02104.x.
8
Novel rearrangements of IS30 carrying plasmids leading to the reactivation of gene expression.携带IS30的质粒的新型重排导致基因表达的重新激活。
Mol Gen Genet. 1987 May;207(2-3):413-20. doi: 10.1007/BF00331609.
9
A novel type of transposon generated by insertion element IS102 present in a pSC101 derivative.一种由存在于pSC101衍生物中的插入元件IS102产生的新型转座子。
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10
Cointegrates between bacteriophage P1 DNA and plasmid pBR322 derivatives suggest molecular mechanisms for P1-mediated transduction of small plasmids.噬菌体P1 DNA与质粒pBR322衍生物之间的共整合体揭示了P1介导的小质粒转导的分子机制。
Mol Gen Genet. 1981;184(1):1-10. doi: 10.1007/BF00271186.

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Evidence of Naturalized Stress-Tolerant Strains of Escherichia coli in Municipal Wastewater Treatment Plants.城市污水处理厂中大肠杆菌自然化耐胁迫菌株的证据。
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Functional organization of the inverted repeats of IS30.

本文引用的文献

1
IS2 insertion is a major cause of spontaneous mutagenesis of the bacteriophage P1: non-random distribution of target sites.IS2插入是噬菌体P1自发诱变的主要原因:靶位点的非随机分布。
EMBO J. 1983;2(1):67-71. doi: 10.1002/j.1460-2075.1983.tb01382.x.
2
Target sequences for the C. elegans transposable element Tc1.秀丽隐杆线虫转座元件Tc1的靶序列。
Nucleic Acids Res. 1983 Oct 25;11(20):7137-40. doi: 10.1093/nar/11.20.7137.
3
A new insertion sequence, IS121, is found on the Mu dI1 (Ap lac) bacteriophage and the Escherichia coli K-12 chromosome.
IS30 反向重复序列的功能组织。
J Bacteriol. 2010 Jul;192(13):3414-23. doi: 10.1128/JB.01382-09. Epub 2010 Apr 23.
4
Integrating prokaryotes and eukaryotes: DNA transposases in light of structure.整合原核生物和真核生物:基于结构的 DNA 转座酶。
Crit Rev Biochem Mol Biol. 2010 Feb;45(1):50-69. doi: 10.3109/10409230903505596.
5
Site-specific recombination by the DDE family member mobile element IS30 transposase.DDE家族成员移动元件IS30转座酶介导的位点特异性重组。
Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):15000-5. doi: 10.1073/pnas.2436518100.
6
IS1630 of Mycoplasma fermentans, a novel IS30-type insertion element that targets and duplicates inverted repeats of variable length and sequence during insertion.发酵支原体的IS1630,一种新型的IS30型插入元件,在插入过程中靶向并复制长度和序列可变的反向重复序列。
J Bacteriol. 1999 Dec;181(24):7597-607. doi: 10.1128/JB.181.24.7597-7607.1999.
7
IS6110-mediated deletions of wild-type chromosomes of Mycobacterium tuberculosis.IS6110介导的结核分枝杆菌野生型染色体缺失
J Bacteriol. 1999 Feb;181(3):1014-20. doi: 10.1128/JB.181.3.1014-1020.1999.
8
Oxygen-insensitive nitroreductases: analysis of the roles of nfsA and nfsB in development of resistance to 5-nitrofuran derivatives in Escherichia coli.氧不敏感型硝基还原酶:大肠杆菌中nfsA和nfsB在对5-硝基呋喃衍生物耐药性形成中的作用分析
J Bacteriol. 1998 Nov;180(21):5529-39. doi: 10.1128/JB.180.21.5529-5539.1998.
9
Insertion sequences.插入序列
Microbiol Mol Biol Rev. 1998 Sep;62(3):725-74. doi: 10.1128/MMBR.62.3.725-774.1998.
10
Pet, an autotransporter enterotoxin from enteroaggregative Escherichia coli.Pet,一种来自肠聚集性大肠杆菌的自身转运毒素。
Infect Immun. 1998 Jul;66(7):3155-63. doi: 10.1128/IAI.66.7.3155-3163.1998.
在Mu dI1(Ap lac)噬菌体和大肠杆菌K-12染色体上发现了一种新的插入序列IS121。
J Bacteriol. 1983 Nov;156(2):669-79. doi: 10.1128/jb.156.2.669-679.1983.
4
Nucleotide sequence of IS26, a new prokaryotic mobile genetic element.新型原核移动遗传元件IS26的核苷酸序列
Nucleic Acids Res. 1983 Sep 24;11(18):6319-30. doi: 10.1093/nar/11.18.6319.
5
Sequence of the C. elegans transposable element Tc1.秀丽隐杆线虫转座元件Tc1的序列。
Nucleic Acids Res. 1983 Jun 25;11(12):4201-9. doi: 10.1093/nar/11.12.4201.
6
Physical analysis of the genomes of hybrid phages between phage P1 and plasmid p15B.噬菌体P1与质粒p15B之间杂交噬菌体基因组的物理分析。
J Mol Biol. 1983 Mar 25;165(1):191-5. doi: 10.1016/s0022-2836(83)80250-2.
7
Is the IS1-flanked r-determinant of the R plasmid NR1 a transposon?R质粒NR1中IS1侧翼的r决定子是转座子吗?
J Gen Microbiol. 1981 Oct;126(2):413-25. doi: 10.1099/00221287-126-2-413.
8
Transposable elements in prokaryotes.原核生物中的转座元件。
Annu Rev Genet. 1981;15:341-404. doi: 10.1146/annurev.ge.15.120181.002013.
9
Cointegrates between bacteriophage P1 DNA and plasmid pBR322 derivatives suggest molecular mechanisms for P1-mediated transduction of small plasmids.噬菌体P1 DNA与质粒pBR322衍生物之间的共整合体揭示了P1介导的小质粒转导的分子机制。
Mol Gen Genet. 1981;184(1):1-10. doi: 10.1007/BF00271186.
10
Genesis and natural history of IS-mediated transposons.插入序列介导的转座子的起源与自然史。
Cold Spring Harb Symp Quant Biol. 1981;45 Pt 1:27-43. doi: 10.1101/sqb.1981.045.01.006.