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体内参与质粒编码rRNA严格调控的DNA区域。

Regions of DNA involved in the stringent control of plasmid-encoded rRNA in vivo.

作者信息

Gourse R L, Stark M J, Dahlberg A E

出版信息

Cell. 1983 Apr;32(4):1347-54. doi: 10.1016/0092-8674(83)90315-x.

DOI:10.1016/0092-8674(83)90315-x
PMID:6188538
Abstract

We have examined the transcription of two plasmid-encoded, stable RNAs; a shortened 16S ribosomal RNA and the spacer transfer RNA2Glu from the Escherichia coli rrnB operon. Plasmid deletions were constructed in vitro, in order to examine the DNA regions required for stringent control of rRNA expression in vivo during amino acid starvation. We find that rRNA synthesized from plasmids does exhibit a relA-dependent, stringent response. The DNA sequences required for this regulation do not extend beyond 20 bases downstream of the P1 transcription initiation site. Deletion of P2, the second of the two tandem rRNA promoters, does not weaken the stringent control of transcripts from P1. These results demonstrate that pause sites for RNA polymerase identified in vitro do not play a significant role in the stringent control of rRNA synthesis in vivo and imply that stringent regulation takes place at the level of initiation, rather than elongation, of transcription. Surprisingly, we find that the presence of extra intact rrnB operons (carried by a multicopy plasmid) reduces the magnitude of the stringent response.

摘要

我们研究了两种质粒编码的稳定RNA的转录情况,即来自大肠杆菌rrnB操纵子的缩短型16S核糖体RNA和间隔区转移RNA2Glu。为了研究在氨基酸饥饿期间体内严格控制rRNA表达所需的DNA区域,我们在体外构建了质粒缺失体。我们发现,从质粒合成的rRNA确实表现出依赖relA的严格反应。这种调控所需的DNA序列不会延伸到P1转录起始位点下游20个碱基以外。两个串联rRNA启动子中的第二个P2的缺失,并不会削弱对来自P1的转录本的严格控制。这些结果表明,体外鉴定出的RNA聚合酶暂停位点在体内rRNA合成的严格控制中并不起重要作用,这意味着严格调控发生在转录起始水平,而非延伸水平。令人惊讶的是,我们发现额外完整的rrnB操纵子(由多拷贝质粒携带)的存在会降低严格反应的幅度。

相似文献

1
Regions of DNA involved in the stringent control of plasmid-encoded rRNA in vivo.体内参与质粒编码rRNA严格调控的DNA区域。
Cell. 1983 Apr;32(4):1347-54. doi: 10.1016/0092-8674(83)90315-x.
2
Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids.多拷贝质粒在体内表达时,对rrnA操纵子中串联的大肠杆菌核糖体RNA启动子的差异严格控制。
Cell. 1983 Apr;32(4):1337-46. doi: 10.1016/0092-8674(83)90314-8.
3
Effects of different growth conditions on the in vivo activity of the tandem Escherichia coli ribosomal RNA promoters P1 and P2.不同生长条件对串联大肠杆菌核糖体RNA启动子P1和P2体内活性的影响。
Mol Gen Genet. 1995 Nov 27;249(3):328-35. doi: 10.1007/BF00290534.
4
Regulation of the Escherichia coli rrnB P2 promoter.大肠杆菌rrnB P2启动子的调控
J Bacteriol. 2003 Jan;185(1):28-34. doi: 10.1128/JB.185.1.28-34.2003.
5
Control of the tRNA-tufB operon in Escherichia coli. 1. rRNA gene dosage effects and growth-rate-dependent regulation.大肠杆菌中tRNA-tufB操纵子的调控。1. rRNA基因剂量效应和生长速率依赖性调控。
Eur J Biochem. 1988 Aug 1;175(2):355-62. doi: 10.1111/j.1432-1033.1988.tb14204.x.
6
Isolated P2 rRNA promoters of Escherichia coli are strong promoters that are subject to stringent control.大肠杆菌的分离型P2 rRNA启动子是受严格控制的强启动子。
J Mol Biol. 1994 Oct 21;243(2):152-6. doi: 10.1006/jmbi.1994.1641.
7
Effects of deletions in the spacer region of the rrnB operon on the transcription of the large ribosomal RNAs from Escherichia coli.rrnB操纵子间隔区缺失对大肠杆菌大核糖体RNA转录的影响
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Cloning of the promoters of an Escherichia coli rRNA gene. New experimental system to study the regulation of rRNA transcription.大肠杆菌rRNA基因启动子的克隆。用于研究rRNA转录调控的新实验系统。
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Expression of rRNA and tRNA genes in Escherichia coli: evidence for feedback regulation by products of rRNA operons.大肠杆菌中rRNA和tRNA基因的表达:rRNA操纵子产物反馈调节的证据。
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Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli.大肠杆菌rrnB操纵子中体外转录的暂停和衰减
Cell. 1981 Dec;27(3 Pt 2):523-31. doi: 10.1016/0092-8674(81)90394-9.

引用本文的文献

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Functional determinants of the Escherichia coli fis promoter: roles of -35, -10, and transcription initiation regions in the response to stringent control and growth phase-dependent regulation.大肠杆菌fis启动子的功能决定因素:-35、-10和转录起始区域在严格控制和生长阶段依赖性调控反应中的作用。
J Bacteriol. 1999 Feb;181(4):1269-80. doi: 10.1128/JB.181.4.1269-1280.1999.
3
Control of rRNA transcription in Escherichia coli.
大肠杆菌中核糖体RNA转录的调控
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4
Growth rate-dependent control of the rrnB P1 core promoter in Escherichia coli.大肠杆菌中rrnB P1核心启动子的生长速率依赖性调控
J Bacteriol. 1994 Sep;176(17):5560-4. doi: 10.1128/jb.176.17.5560-5564.1994.
5
A physical map of the Myxococcus xanthus chromosome.黄色粘球菌染色体的物理图谱。
Proc Natl Acad Sci U S A. 1994 Sep 27;91(20):9584-7. doi: 10.1073/pnas.91.20.9584.
6
Conserved features of coordinately regulated E. coli promoters.协同调控的大肠杆菌启动子的保守特征。
Nucleic Acids Res. 1984 Mar 26;12(6):2605-18. doi: 10.1093/nar/12.6.2605.
7
Carbon starvation and growth rate-dependent regulation of the Escherichia coli ribosomal RNA promoters: differential control of dual promoters.大肠杆菌核糖体RNA启动子的碳饥饿和生长速率依赖性调控:双启动子的差异控制
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8
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