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一种特异性刺激酵母DNA聚合酶I的酵母单链脱氧核糖核酸结合蛋白的分离。

Isolation of a yeast single-strand deoxyribonucleic acid binding protein that specifically stimulates yeast DNA polymerase I.

作者信息

LaBonne S G, Dumas L B

出版信息

Biochemistry. 1983 Jun 21;22(13):3214-9. doi: 10.1021/bi00282a027.

DOI:10.1021/bi00282a027
PMID:6192841
Abstract

We sought a protein from yeast that would bind more strongly to single-stranded DNA than to duplex DNA and would stimulate the activity of the major yeast DNA polymerase, but not polymerases from other organisms. We isolated a protein that binds about 200 times more strongly to single-stranded DNA than duplex DNA and stimulates yeast DNA polymerase I activity 4-5-fold. It inhibits synthesis catalyzed by calf thymus DNA polymerase alpha and has little effect on T4 DNA polymerase. This yeast protein, SSB-1, has a molecular weight of approximately 40 000. At apparent saturation there is one protein molecule bound per 40 nucleotides. Protein binding causes the single-stranded DNA molecule to assume a relatively extended conformation. It binds to single-stranded RNA as strongly as to DNA. SSB-1 increases the initial rate of polymerization catalyzed by yeast DNA polymerase I apparently by increasing the processivity of the enzyme. We estimate there are 7500-30 000 molecules of SSB-1 per yeast cell, enough to bind at least 400-1600 nucleotides per replication fork. Thus it is present in sufficient abundance to participate in DNA replication in vivo in the manner suggested by these in vitro experiments.

摘要

我们寻找一种来自酵母的蛋白质,该蛋白质与单链DNA的结合力要比与双链DNA的结合力更强,并且能够刺激酵母主要DNA聚合酶的活性,但对其他生物体的聚合酶没有作用。我们分离出一种蛋白质,它与单链DNA的结合力比与双链DNA的结合力强约200倍,并能将酵母DNA聚合酶I的活性提高4至5倍。它抑制小牛胸腺DNA聚合酶α催化的合成,而对T4 DNA聚合酶几乎没有影响。这种酵母蛋白SSB - 1的分子量约为40000。在明显饱和时,每40个核苷酸结合一个蛋白质分子。蛋白质结合使单链DNA分子呈现出相对伸展的构象。它与单链RNA的结合力与和DNA的结合力一样强。SSB - 1显然是通过提高酶的持续合成能力来提高酵母DNA聚合酶I催化的聚合反应的初始速率。我们估计每个酵母细胞中有7500 - 30000个SSB - 1分子,足以在每个复制叉处结合至少400 - 1600个核苷酸。因此,它的丰度足以按照这些体外实验所表明的方式参与体内DNA复制。

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Isolation of a yeast single-strand deoxyribonucleic acid binding protein that specifically stimulates yeast DNA polymerase I.一种特异性刺激酵母DNA聚合酶I的酵母单链脱氧核糖核酸结合蛋白的分离。
Biochemistry. 1983 Jun 21;22(13):3214-9. doi: 10.1021/bi00282a027.
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引用本文的文献

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Characterization of a mitochondrial protein binding to single-stranded DNA.一种与单链DNA结合的线粒体蛋白的特性分析。
Nucleic Acids Res. 1985 Mar 11;13(5):1703-16. doi: 10.1093/nar/13.5.1703.
2
Isolation of the gene encoding yeast single-stranded nucleic acid binding protein 1.酵母单链核酸结合蛋白1编码基因的分离
Proc Natl Acad Sci U S A. 1986 Feb;83(4):877-81. doi: 10.1073/pnas.83.4.877.
3
Participation of ATP in the binding of a yeast replicative complex to DNA.ATP参与酵母复制复合体与DNA的结合。
Biochem J. 1987 Aug 15;246(1):213-9. doi: 10.1042/bj2460213.
4
Yeast chromosome replication and segregation.酵母染色体的复制与分离。
Microbiol Rev. 1988 Dec;52(4):568-601. doi: 10.1128/mr.52.4.568-601.1988.
5
Multiple functions of human single-stranded-DNA binding protein in simian virus 40 DNA replication: single-strand stabilization and stimulation of DNA polymerases alpha and delta.人单链DNA结合蛋白在猴病毒40 DNA复制中的多种功能:单链稳定以及对DNA聚合酶α和δ的刺激作用
Proc Natl Acad Sci U S A. 1989 Dec;86(24):9757-61. doi: 10.1073/pnas.86.24.9757.
6
An essential Saccharomyces cerevisiae single-stranded DNA binding protein is homologous to the large subunit of human RP-A.一种必需的酿酒酵母单链DNA结合蛋白与人类RP-A的大亚基同源。
EMBO J. 1990 Jul;9(7):2321-9. doi: 10.1002/j.1460-2075.1990.tb07404.x.
7
SSB-1 of the yeast Saccharomyces cerevisiae is a nucleolar-specific, silver-binding protein that is associated with the snR10 and snR11 small nuclear RNAs.酿酒酵母的SSB-1是一种核仁特异性的银结合蛋白,与snR10和snR11小核RNA相关。
J Cell Biol. 1990 Nov;111(5 Pt 1):1741-51. doi: 10.1083/jcb.111.5.1741.