通过M13mp7鸟枪法测序获得的花椰菜花叶病毒感染性克隆的完整核苷酸序列。
The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing.
作者信息
Gardner R C, Howarth A J, Hahn P, Brown-Luedi M, Shepherd R J, Messing J
出版信息
Nucleic Acids Res. 1981 Jun 25;9(12):2871-88. doi: 10.1093/nar/9.12.2871.
Abstract
We have determined the complete primary structure (8031 base pairs) of an infectious clone of cauliflower mosaic virus strain CM1841. The sequence was obtained using the strategy of cloning shotgun restriction fragments in the sequencing vector M13mp7. Comparison of the CM1841 sequence with that published for another caMV strain (Strasbourg) reveals 4.4% changes, mostly nucleotide substitutions with a few small insertions and deletions. The six open reading frames in the sequence of the Strasbourg isolate are also present in CM1841.
摘要
我们已经确定了花椰菜花叶病毒CM1841株感染性克隆的完整一级结构（8031个碱基对）。该序列是通过将鸟枪法限制性片段克隆到测序载体M13mp7中的策略获得的。将CM1841序列与已发表的另一种花椰菜花叶病毒株（斯特拉斯堡株）的序列进行比较，发现有4.4%的变化，主要是核苷酸替换，还有一些小的插入和缺失。斯特拉斯堡分离株序列中的六个开放阅读框在CM1841中也存在。
相似文献
1
The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing.通过M13mp7鸟枪法测序获得的花椰菜花叶病毒感染性克隆的完整核苷酸序列。
Nucleic Acids Res. 1981 Jun 25;9(12):2871-88. doi: 10.1093/nar/9.12.2871.
2
Nucleotide sequence of DNA from an altered-virulence isolate D/H of the cauliflower mosaic virus.花椰菜花叶病毒毒力改变分离株D/H的DNA核苷酸序列。
Gene. 1982 Oct;19(3):239-49. doi: 10.1016/0378-1119(82)90013-0.
3
Mutagenesis of cauliflower mosaic virus.花椰菜花叶病毒的诱变
Gene. 1983 Nov;25(2-3):189-99. doi: 10.1016/s0378-1119(83)80001-8.
4
Insertional mutagenesis of the cauliflower mosaic virus genome.花椰菜花叶病毒基因组的插入诱变
Gene. 1983 Nov;25(2-3):201-8. doi: 10.1016/0378-1119(83)90224-x.
5
Nuclei purified from cauliflower mosaic virus-infected turnip leaves contain subgenomic, covalently closed circular cauliflower mosaic virus DNAs.从感染花椰菜花叶病毒的芜菁叶片中纯化得到的细胞核含有亚基因组、共价闭合环状花椰菜花叶病毒DNA。
Nucleic Acids Res. 1983 Dec 20;11(24):8901-14. doi: 10.1093/nar/11.24.8901.
6
Infectivity of plasmids containing brome mosaic virus cDNA linked to the cauliflower mosaic virus 35S RNA promoter.含有与花椰菜花叶病毒35S RNA启动子相连的雀麦花叶病毒cDNA的质粒的感染性。
J Gen Virol. 1991 Feb;72 ( Pt 2):243-6. doi: 10.1099/0022-1317-72-2-243.
7
Immunological detection of cauliflower mosaic virus gene V protein produced in engineered bacteria or infected plants.对工程菌或受感染植物中产生的花椰菜花叶病毒基因V蛋白的免疫学检测。
Gene. 1985;36(3):271-9. doi: 10.1016/0378-1119(85)90182-9.
8
A viable mutation in cauliflower mosaic virus, a retroviruslike plant virus, separates its capsid protein and polymerase genes.花椰菜花叶病毒（一种逆转录病毒样植物病毒）中的一个可行突变将其衣壳蛋白基因和聚合酶基因分开。
J Virol. 1988 Apr;62(4):1460-3. doi: 10.1128/JVI.62.4.1460-1463.1988.
9
The complete nucleotide sequence of cauliflower mosaic virus isolate BBC.花椰菜花叶病毒分离株BBC的完整核苷酸序列。
Gene. 1993 Jan 30;123(2):255-7. doi: 10.1016/0378-1119(93)90133-n.
10
Biological activity of cauliflower mosaic virus aphid transmission factor expressed in a heterologous system.在异源系统中表达的花椰菜花叶病毒蚜虫传播因子的生物活性。
Virology. 1993 Feb;192(2):643-50. doi: 10.1006/viro.1993.1080.
引用本文的文献
1
Large Fragment InDels Reshape Genome Structure of Porcine Alveolar Macrophage 3D4/21 Cells.大片段缺失重塑猪肺泡巨噬细胞 3D4/21 细胞的基因组结构。
Genes (Basel). 2022 Aug 24;13(9):1515. doi: 10.3390/genes13091515.
2
Mass Spectrometry-Based Lipidomics: An Overview.基于质谱的脂质组学：概述。
Methods Mol Biol. 2021;2306:1-10. doi: 10.1007/978-1-0716-1410-5_1.
3
Plant evolution and environmental adaptation unveiled by long-read whole-genome sequencing of .通过. 的长读全基因组测序揭示植物进化和环境适应
Proc Natl Acad Sci U S A. 2019 Sep 17;116(38):18893-18899. doi: 10.1073/pnas.1910401116. Epub 2019 Sep 4.
4
In silico comparative analysis of promoters derived from plant pararetroviruses.植物副逆转录病毒启动子的计算机模拟比较分析
Virusdisease. 2017 Dec;28(4):416-421. doi: 10.1007/s13337-017-0410-8. Epub 2017 Nov 28.
5
Setting Up Shop: The Formation and Function of the Viral Factories of .开设工厂：……病毒工厂的形成与功能
Front Plant Sci. 2017 Oct 30;8:1832. doi: 10.3389/fpls.2017.01832. eCollection 2017.
6
Clinical and biological insights from viral genome sequencing.病毒基因组测序的临床与生物学见解。
Nat Rev Microbiol. 2017 Mar;15(3):183-192. doi: 10.1038/nrmicro.2016.182. Epub 2017 Jan 16.
7
Profile of Joachim Messing.约阿希姆·梅辛简介。
Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):7935-7. doi: 10.1073/pnas.1608857113. Epub 2016 Jul 5.
8
Analysis of tandem gene copies in maize chromosomal regions reconstructed from long sequence reads.从长序列 reads 重建的玉米染色体区域中串联基因拷贝的分析。
Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):7949-56. doi: 10.1073/pnas.1608775113. Epub 2016 Jun 27.
9
Mutations within A 35 amino acid region of P6 influence self-association, inclusion body formation, and Caulimovirus infectivity.P6蛋白35个氨基酸区域内的突变会影响自我缔合、包涵体形成以及花椰菜花叶病毒的感染性。
Virology. 2015 Feb;476:26-36. doi: 10.1016/j.virol.2014.11.017. Epub 2014 Dec 12.
10
The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.紫萍基因组揭示了其幼态持续、快速生长和水生生活方式的相关见解。
Nat Commun. 2014;5:3311. doi: 10.1038/ncomms4311.
本文引用的文献
1
Isolation and Mapping of Small Cauliflower Mosaic Virus DNA Fragments Active as Promoters in Escherichia coli.在大肠杆菌中作为启动子具有活性的小花椰菜花叶病毒DNA小片段的分离与定位
J Virol. 1981 Feb;37(2):673-82. doi: 10.1128/JVI.37.2.673-682.1981.
2
Nucleotide sequence of cauliflower mosaic virus DNA.花椰菜花叶病毒DNA的核苷酸序列。
Cell. 1980 Aug;21(1):285-94. doi: 10.1016/0092-8674(80)90136-1.
3
Restriction map of native and cloned cauliflower mosaic virus DNA.天然和克隆的花椰菜花叶病毒DNA的限制性图谱。
Gene. 1980 Oct;11(1-2):21-31. doi: 10.1016/0378-1119(80)90083-9.
4
The rapid purification of T4 DNA ligase from a lambda T4 lig lysogen.从λT4连接酶溶原菌中快速纯化T4 DNA连接酶。
J Biol Chem. 1980 Feb 10;255(3):813-5.
5
Spacer DNA sequences upstream of the T-A-T-A-A-A-T-A sequence are essential for promotion of H2A histone gene transcription in vivo.T-A-T-A-A-A-T-A序列上游的间隔DNA序列对于体内H2A组蛋白基因转录的促进至关重要。
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7102-6. doi: 10.1073/pnas.77.12.7102.
6
Specific in vitro transcription of conalbumin gene is drastically decreased by single-point mutation in T-A-T-A box homology sequence.伴清蛋白基因的特异性体外转录因T-A-T-A盒同源序列中的单点突变而急剧减少。
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7024-8. doi: 10.1073/pnas.77.12.7024.
7
A system for shotgun DNA sequencing.一种用于鸟枪法DNA测序的系统。
Nucleic Acids Res. 1981 Jan 24;9(2):309-21. doi: 10.1093/nar/9.2.309.
8
Nucleotide sequence of the filamentous bacteriophage M13 DNA genome: comparison with phage fd.丝状噬菌体M13 DNA基因组的核苷酸序列：与噬菌体fd的比较。
Gene. 1980 Oct;11(1-2):129-48. doi: 10.1016/0378-1119(80)90093-1.
9
The nucleotide sequence of an untranslated but conserved domain at the 3' end of the avian sarcoma virus genome.禽肉瘤病毒基因组3'端一个未翻译但保守结构域的核苷酸序列。
Nucleic Acids Res. 1980 Jul 11;8(13):2967-84. doi: 10.1093/nar/8.13.2967.
10
The ovalbumin gene-sequence of putative control regions.假定调控区的卵清蛋白基因序列。
Nucleic Acids Res. 1980 Jan 11;8(1):127-42. doi: 10.1093/nar/8.1.127.
Zotero 插件