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马细胞色素c表面电荷的不对称分布。功能意义。

The asymmetric distribution of charges on the surface of horse cytochrome c. Functional implications.

作者信息

Koppenol W H, Margoliash E

出版信息

J Biol Chem. 1982 Apr 25;257(8):4426-37.

PMID:6279635
Abstract

The electric potential field around native horse cytochrome c and 12 singly modified 4-carboxy-2,4-dinitrophenyl- (CDNP) lysine cytochromes c is asymmetric, mainly because of the inhomogeneous distribution of negative charges. Dipole moments of 325 and 308 debye, (1.08.10(-27) and 1.03.10(-27) coulomb.meter), respectively, were calculated for horse ferri- and ferrocytochrome c. The angle between the heme plane and the dipole vector of horse ferricytochrome c is 33 degrees and increases 1 degree upon reduction to the ferrous form. Dipole moments of the CDNP-lysine cytochromes c differ from that of native cytochrome c by as much as 140 debye in magnitude and 45 degrees in direction. It is proposed that its dipole moment causes cytochrome c to orient itself in the electric fields of its redox partners, and that the CDNP-lysine cytochromes c, which have different dipole moments, do not form a productive complex. Reorientation to the correct position for electron transfer increases the activation energy and lowers the rate of reaction. This model describes quantitatively the relative activities of those CDNP-lysine cytochromes c which are modified outside of the interaction domain and it allows correction of the activities of those modified inside the domain, on the front surface of the molecule, for the change in dipole moment. The interaction domain for the reaction with cytochrome c reductase includes in decreasing order of involvement lysines 13, 72, 86, 27, and 87. That for the reaction with cytochrome c oxidase is slightly smaller, with lysines 13, 72, 86, and 27. The cytochrome c peroxidase domain is the largest of all and is defined by lysines 72, 86, 13, 87, 27,, and 73. All refined interaction domains encompass the exposed heme edge and are to a large extent overlapping, indicating that electron transfer takes place at or close to this prosthetic group and that cytochrome c must move on the outer surface of the inner mitochondrial membrane during electron transport between reductase and oxidase. For a quantitative description of the electrostatic interaction of cytochrome c with other molecules, it is essential to take into account the totality of its charge configuration.

摘要

天然马细胞色素c以及12种单修饰的4 - 羧基 - 2,4 - 二硝基苯基 - (CDNP)赖氨酸细胞色素c周围的电势场是不对称的,主要是由于负电荷分布不均匀。分别计算出马铁细胞色素c和亚铁细胞色素c的偶极矩为325和308德拜(1.08×10⁻²⁷和1.03×10⁻²⁷库仑·米)。马高铁细胞色素c的血红素平面与偶极矢量之间的夹角为33度,还原为亚铁形式时增加1度。CDNP - 赖氨酸细胞色素c的偶极矩在大小上与天然细胞色素c相差多达140德拜,方向上相差45度。有人提出,其偶极矩使细胞色素c在其氧化还原伙伴的电场中自行取向,而具有不同偶极矩的CDNP - 赖氨酸细胞色素c不会形成有效的复合物。重新取向到电子转移的正确位置会增加活化能并降低反应速率。该模型定量描述了那些在相互作用域之外修饰的CDNP - 赖氨酸细胞色素c的相对活性,并允许校正那些在分子前表面的域内修饰的细胞色素c的活性,以考虑偶极矩的变化。与细胞色素c还原酶反应的相互作用域按参与程度递减顺序包括赖氨酸13、72、86、27和87。与细胞色素c氧化酶反应的相互作用域稍小,包括赖氨酸13、72、86和27。细胞色素c过氧化物酶域是所有域中最大的,由赖氨酸72、86、13、87、27和73定义。所有精细的相互作用域都包含暴露的血红素边缘,并且在很大程度上相互重叠,这表明电子转移发生在该辅基处或其附近,并且细胞色素c在还原酶和氧化酶之间的电子传递过程中必须在线粒体内膜的外表面移动。为了定量描述细胞色素c与其他分子的静电相互作用,必须考虑其电荷构型的整体情况。

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