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潜在的Z-DNA形成序列在人类基因组中高度分散。

Potential Z-DNA forming sequences are highly dispersed in the human genome.

作者信息

Hamada H, Kakunaga T

出版信息

Nature. 1982 Jul 22;298(5872):396-8. doi: 10.1038/298396a0.

DOI:10.1038/298396a0
PMID:6283389
Abstract

Recent analyses of the three-dimensional structure of synthetic DNA molecules has revealed the existence of a left-handed double-helical conformation of DNA, called Z-DNA. The Z-DNA structure was first observed in molecules having alternating guanine and cytosine bases, but has now also been shown for molecules of sequence poly(dT-dG) . poly(dC-dA) (refs 4-7). If Z-DNA occurs naturally then it might have quite different reactivities with molecules such as proteins or carcinogens from right-handed B-DNA. The interconversion of sequences between B and Z forms, under the influence, for example, of DNA binding proteins or chemical modification, may be important in regulating DNA function. So far, little data have been published on the occurrence of potential Z-DNA forming sequences in eukaryotic DNA. Here we report the presence of a sequence of 50 alternating dT and dG residues within one of the introns of a human cardiac muscle actin gene. Also, using a probe specific for poly(dT-dG) sequences, we have also found that potential Z-DNA forming sequences are highly repeated in the human genome.

摘要

近期对合成DNA分子三维结构的分析揭示了一种左手双螺旋DNA构象的存在,即Z-DNA。Z-DNA结构最初是在含有交替鸟嘌呤和胞嘧啶碱基的分子中观察到的,但现在也已在聚(dT-dG).聚(dC-dA)序列的分子中得到证实(参考文献4-7)。如果Z-DNA天然存在,那么它与诸如蛋白质或致癌物等分子的反应性可能与右手B-DNA有很大不同。例如,在DNA结合蛋白或化学修饰的影响下,B型和Z型序列之间的相互转换可能对调节DNA功能很重要。到目前为止,关于真核生物DNA中潜在Z-DNA形成序列的存在情况,几乎没有公开的数据。在此我们报告,在人类心肌肌动蛋白基因的一个内含子中存在一段由五十个交替的dT和dG残基组成的序列。此外,使用针对聚(dT-dG)序列的探针,我们还发现潜在的Z-DNA形成序列在人类基因组中高度重复。

相似文献

1
Potential Z-DNA forming sequences are highly dispersed in the human genome.潜在的Z-DNA形成序列在人类基因组中高度分散。
Nature. 1982 Jul 22;298(5872):396-8. doi: 10.1038/298396a0.
2
A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes.一种具有形成Z-DNA潜力的新型重复元件广泛存在于进化上多样的真核生物基因组中。
Proc Natl Acad Sci U S A. 1982 Nov;79(21):6465-9. doi: 10.1073/pnas.79.21.6465.
3
Inhibition of the herpes simplex virus thymidine kinase gene transfection in Ltk- cells by potential Z-DNA forming polymers.潜在的Z-DNA形成聚合物对Ltk-细胞中单纯疱疹病毒胸苷激酶基因转染的抑制作用。
Nucleic Acids Res. 1985 Jul 25;13(14):5111-26. doi: 10.1093/nar/13.14.5111.
4
Left-handed Z-DNA helices in polymers, restriction fragments, and recombinant plasmids.聚合物、限制性片段和重组质粒中的左手Z-DNA螺旋。
J Biomol Struct Dyn. 1983 Dec;1(4):999-1009. doi: 10.1080/07391102.1983.10507498.
5
Conformational variability of poly(dA-dT).poly(dA-dT) and some other deoxyribonucleic acids includes a novel type of double helix.聚(dA-dT)·聚(dA-dT)及其他一些脱氧核糖核酸的构象变异性包括一种新型双螺旋结构。
J Biomol Struct Dyn. 1985 Aug;3(1):67-83. doi: 10.1080/07391102.1985.10508399.
6
Characterization of genomic poly(dT-dG).poly(dC-dA) sequences: structure, organization, and conformation.基因组聚(dT-dG)·聚(dC-dA)序列的表征:结构、组织与构象
Mol Cell Biol. 1984 Dec;4(12):2610-21. doi: 10.1128/mcb.4.12.2610-2621.1984.
7
A left-handed (Z) conformation of poly(dA-dC).poly(dG-dT) induced by polyamines.多胺诱导的聚(dA-dC)·聚(dG-dT)的左手(Z)构象
Nucleic Acids Res. 1986 Aug 26;14(16):6721-33. doi: 10.1093/nar/14.16.6721.
8
Chromatin structure of the potential Z-forming sequence (dT-dG)n X (dC-dA)n. Evidence for an "alternating-B" conformation.潜在Z型形成序列(dT-dG)n X(dC-dA)n的染色质结构。“交替B”构象的证据。
J Mol Biol. 1985 May 25;183(2):251-65. doi: 10.1016/0022-2836(85)90218-9.
9
Conformational peculiarities of polynucleotides with a nonrandom base sequence according to the 1H----3H exchange rate in C8H groups of purinic residues.根据嘌呤残基C8H基团中1H→3H的交换率,具有非随机碱基序列的多核苷酸的构象特性。
J Biomol Struct Dyn. 1987 Dec;5(3):601-14. doi: 10.1080/07391102.1987.10506415.
10
The sequence (dC-dA)n X (dG-dT)n forms left-handed Z-DNA in negatively supercoiled plasmids.序列(dC-dA)n×(dG-dT)n在负超螺旋质粒中形成左手Z-DNA。
Proc Natl Acad Sci U S A. 1983 Apr;80(7):1821-5. doi: 10.1073/pnas.80.7.1821.

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