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玉米醇溶蛋白信使核糖核酸序列微异质性分析。

Analysis of sequence microheterogeneity among zein messenger RNAs.

作者信息

Marks M D, Larkins B A

出版信息

J Biol Chem. 1982 Sep 10;257(17):9976-83.

PMID:6286660
Abstract

We have synthesized cDNA clones for maize zein proteins using mRNAs purified from developing endosperm. Analysis of these clones by in vitro translation of hybrid-selected mRNAs suggested differences in sequence homology among the mRNAs for the different molecular weight zein polypeptides. These differences were also apparent in restriction maps of clones corresponding to the Mr = 22,000, 19,000, and 15,000 zeins. Using radioactive cDNA inserts as probes, we measured the extent of sequence homology among zein clones with a sensitive dot hybridization procedure. By this analysis, it was possible to distinguish clones corresponding to the different molecular weight zeins at low (Tm - 49 degrees C) to moderate (Tm - 35 degrees C) criteria, while under more stringent conditions (Tm - 20 degrees C), distinctions could be made between zein sequences within a molecular weight group. This analysis distinguish three different mRNAs for each of the Mr = 22,000 and Mr = 19,000 zeins, but only one was detected for the Mr = 15,000 zein. Comparison of the nucleotide sequences of clones for the Mr = 22,000 and Mr = 19,000 zeins showed about 60% homology throughout the coding regions. This analysis also revealed the presence of short repetitive nucleotide sequences corresponding to tandem repeats of approximately 20 amino acids in both groups of proteins.

摘要

我们利用从发育中的胚乳中纯化的mRNA,合成了玉米醇溶蛋白的cDNA克隆。通过对杂交选择的mRNA进行体外翻译来分析这些克隆,结果表明不同分子量醇溶蛋白多肽的mRNA之间在序列同源性上存在差异。这些差异在对应于分子量为22,000、19,000和15,000醇溶蛋白的克隆的限制性图谱中也很明显。我们使用放射性cDNA插入片段作为探针,通过灵敏的点杂交程序测量了醇溶蛋白克隆之间的序列同源程度。通过这种分析,在低严谨度(熔解温度-49℃)到中等严谨度(熔解温度-35℃)的条件下,能够区分对应于不同分子量醇溶蛋白的克隆,而在更严格的条件下(熔解温度-20℃),可以在一个分子量组内的醇溶蛋白序列之间做出区分。这种分析在分子量为22,000和19,000的醇溶蛋白中各自区分出三种不同的mRNA,但对于分子量为15,000的醇溶蛋白只检测到一种。对分子量为22,000和19,000的醇溶蛋白的克隆的核苷酸序列进行比较,结果显示在整个编码区域中同源性约为60%。该分析还揭示了在这两组蛋白质中都存在对应于约20个氨基酸串联重复的短重复核苷酸序列。

相似文献

1
Analysis of sequence microheterogeneity among zein messenger RNAs.玉米醇溶蛋白信使核糖核酸序列微异质性分析。
J Biol Chem. 1982 Sep 10;257(17):9976-83.
2
Nucleotide sequence analysis of zein mRNAs from maize endosperm.玉米胚乳醇溶蛋白信使核糖核酸的核苷酸序列分析
J Biol Chem. 1985 Dec 25;260(30):16451-9.
3
Quantitative analysis of the accumulation of Zein mRNA during maize endosperm development.玉米胚乳发育过程中玉米醇溶蛋白mRNA积累的定量分析。
J Biol Chem. 1985 Dec 25;260(30):16445-50.
4
Genomics analysis of genes expressed in maize endosperm identifies novel seed proteins and clarifies patterns of zein gene expression.对玉米胚乳中表达的基因进行基因组学分析,鉴定出新型种子蛋白并阐明了醇溶蛋白基因的表达模式。
Plant Cell. 2001 Oct;13(10):2297-317. doi: 10.1105/tpc.010240.
5
Sequence analysis of zein cDNAs obtained by an efficient mRNA cloning method.通过高效mRNA克隆方法获得的玉米醇溶蛋白cDNA的序列分析。
Nucleic Acids Res. 1983 Jul 25;11(14):4891-906. doi: 10.1093/nar/11.14.4891.
6
Structural and transcriptional analysis of DNA sequences flanking genes that encode 19 kilodalton zeins.编码19千道尔顿醇溶蛋白的基因侧翼DNA序列的结构与转录分析
Mol Gen Genet. 1987 Apr;207(1):90-8. doi: 10.1007/BF00331495.
7
Sequence analysis and characterization of a maize gene encoding a high-sulfur zein protein of Mr 15,000.一个编码15000道尔顿高硫醇溶蛋白的玉米基因的序列分析与特性鉴定
J Biol Chem. 1986 May 15;261(14):6279-84.
8
Zein gene organization in maize and related grasses.玉米及相关禾本科植物中的玉米醇溶蛋白基因组织。
J Mol Evol. 1984;20(3-4):330-40. doi: 10.1007/BF02104739.
9
Direction of zein gene transcription in maize genomic clones.玉米基因组克隆中玉米醇溶蛋白基因的转录方向。
Biochem Biophys Res Commun. 1982 Aug 31;107(4):1236-42. doi: 10.1016/s0006-291x(82)80130-7.
10
Cloning of double stranded DNAs derived from polysomal mRNA of maize endosperm: isolation and characterisation of zein clones.从玉米胚乳多聚核糖体mRNA中获得的双链DNA的克隆:玉米醇溶蛋白克隆的分离与鉴定
Nucleic Acids Res. 1979 Jun 25;6(8):2707-15. doi: 10.1093/nar/6.8.2707.

引用本文的文献

1
Conformations of a highly expressed Z19 α-zein studied with AlphaFold2 and MD simulations.用 AlphaFold2 和 MD 模拟研究高表达的 Z19α-zein 构象。
PLoS One. 2024 May 8;19(5):e0293786. doi: 10.1371/journal.pone.0293786. eCollection 2024.
2
A 23.8-kD alpha-zein with N-terminal sequence and immunological properties similar to 26.7-kD alpha-zeins.一种 23.8kDa 的α-zein,其 N 端序列和免疫学性质与 26.7kDa 的α-zein 相似。
Plant Mol Biol. 1987 Sep;9(5):421-30. doi: 10.1007/BF00015874.
3
cDNA cloning of an mRNA encoding a sulfur-rich 10 kDa prolamin polypeptide in rice seeds.
cDNA 克隆编码水稻种子富含硫的 10 kDa 醇溶蛋白多肽的 mRNA。
Plant Mol Biol. 1989 Feb;12(2):123-30. doi: 10.1007/BF00020497.
4
DNA methylation and tissue-specific transcription of the storage protein genes of maize.玉米贮藏蛋白基因的 DNA 甲基化与组织特异性转录。
Plant Mol Biol. 1988 Mar;11(2):203-14. doi: 10.1007/BF00015672.
5
Characterization of Polypeptides Corresponding to Clones of Maize Zein mRNAS.玉米醇溶蛋白 mRNA 克隆所对应的多肽的特性。
Plant Physiol. 1987 Jun;84(2):291-7. doi: 10.1104/pp.84.2.291.
6
Molecular cloning of cDNA for Avena phytochrome.燕麦光敏色素 cDNA 的分子克隆。
Proc Natl Acad Sci U S A. 1984 Apr;81(8):2332-6. doi: 10.1073/pnas.81.8.2332.
7
Each zein gene class can produce polypeptides of different sizes.每个玉米醇溶蛋白基因类都能产生不同大小的多肽。
EMBO J. 1985 May;4(5):1103-10. doi: 10.1002/j.1460-2075.1985.tb03746.x.
8
Identification of sequences involved in the polyadenylation of higher plant nuclear transcripts using Agrobacterium T-DNA genes as models.以农杆菌T-DNA基因作为模型鉴定高等植物核转录本聚腺苷酸化所涉及的序列。
EMBO J. 1983;2(3):419-26. doi: 10.1002/j.1460-2075.1983.tb01439.x.
9
A defective signal peptide tethers the floury-2 zein to the endoplasmic reticulum membrane.一个有缺陷的信号肽将粉质-2玉米醇溶蛋白栓系在内质网膜上。
Plant Physiol. 1997 May;114(1):345-52. doi: 10.1104/pp.114.1.345.
10
Sequence analysis of 22 kDa-like alpha-coixin genes and their comparison with homologous zein and kafirin genes reveals highly conserved protein structure and regulatory elements.对22 kDa样α-伴清蛋白基因进行序列分析,并将其与同源的玉米醇溶蛋白和高粱醇溶蛋白基因进行比较,结果显示其蛋白质结构和调控元件高度保守。
Plant Mol Biol. 1993 Mar;21(5):765-78. doi: 10.1007/BF00027110.