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插入序列可诱导嵌合质粒发生拓扑修饰和模板激活。

Topological modifications and template activation are induced in chimaeric plasmids by inserted sequences.

作者信息

Carnevali F, Caserta M, Di Mauro E

出版信息

J Mol Biol. 1983 Mar 25;165(1):59-77. doi: 10.1016/s0022-2836(83)80242-3.

DOI:10.1016/s0022-2836(83)80242-3
PMID:6302285
Abstract

The effect of the insertion of foreign genes or gene systems in closed DNA domains has been investigated in vitro in purified systems. We observe that in chimaeric plasmids two apparently independent classes of modifications, (1) functional and (2) topological, do take place in defined instances. (1) Among the screened yeast gene systems, examples have been found of DNA sequences that upon insertion cause activation of in vitro transcription of distant genes. (2) Foreign DNA sequences may lead to new topological features of the harbouring plasmids; it is shown that more than one S1-sensitive secondary structure may be contemporaneously present on the same chimaeric plasmid. DNA superhelicity is a prerequisite of these modifications. The two classes of effects (1) functional and (2) topological are not a priori directly related one to the other but appear to be two independent consequences of the same cause: the insertion of foreign DNA sequences into closed DNA domains. These observations suggest a regulatory model of gene expression based on alternative topologies of closed DNA domains.

摘要

在体外纯化系统中,研究了将外源基因或基因系统插入封闭DNA结构域的效果。我们观察到,在嵌合质粒中,两种明显独立的修饰类型,即(1)功能性修饰和(2)拓扑学修饰,确实会在特定情况下发生。(1)在筛选的酵母基因系统中,已发现一些DNA序列的例子,这些序列插入后会导致远距离基因的体外转录激活。(2)外源DNA序列可能会导致所携带质粒出现新的拓扑特征;结果表明,同一嵌合质粒上可能同时存在不止一种对S1敏感的二级结构。DNA超螺旋是这些修饰的前提条件。这两类效应,即(1)功能性效应和(2)拓扑学效应,并非先验地直接相互关联,而是似乎是同一原因的两个独立结果:将外源DNA序列插入封闭DNA结构域。这些观察结果提示了一种基于封闭DNA结构域的替代拓扑结构的基因表达调控模型。

相似文献

1
Topological modifications and template activation are induced in chimaeric plasmids by inserted sequences.插入序列可诱导嵌合质粒发生拓扑修饰和模板激活。
J Mol Biol. 1983 Mar 25;165(1):59-77. doi: 10.1016/s0022-2836(83)80242-3.
2
Activation of in vitro transcription and topology of closed DNA domains.
J Biol Chem. 1985 Jan 10;260(1):152-9.
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Transitions in topological organization of supercoiled DNA domains as a potential regulatory mechanism.超螺旋DNA结构域拓扑组织的转变作为一种潜在的调控机制。
J Biol Chem. 1984 Oct 25;259(20):12633-43.
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Yeast RNA polymerase II transcription of circular DNA at different degrees of supercoiling.酵母RNA聚合酶II对不同超螺旋程度的环状DNA进行转录。
Nucleic Acids Res. 1982 Sep 11;10(17):5197-208. doi: 10.1093/nar/10.17.5197.
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Selective in vitro transcription by purified yeast RNA polymerase II on cloned 2 micron DNA.纯化的酵母RNA聚合酶II对克隆的2μm DNA进行的体外选择性转录。
Nucleic Acids Res. 1981 Aug 25;9(16):3959-78. doi: 10.1093/nar/9.16.3959.
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Sensitivity of intergenic regions of yeast mitochondrial DNA to single-strand-specific nucleases.
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In vitro transcription of the yeast alcohol dehydrogenase I gene by homologous RNA polymerase B (II). Selective initiation and discontinuous elongation on a supercoiled template.酵母乙醇脱氢酶I基因由同源RNA聚合酶B(II)进行的体外转录。在超螺旋模板上的选择性起始和不连续延伸。
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DNA superhelicity affects the formation of transcription preinitiation complex on eukaryotic genes differently.DNA超螺旋对真核基因转录起始前复合物的形成有不同影响。
Nucleic Acids Res. 1991 Jun 11;19(11):2907-11. doi: 10.1093/nar/19.11.2907.
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Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants.酵母DNA拓扑异构酶突变体中转录依赖的DNA超螺旋化
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T7 RNA polymerase cannot transcribe through a highly knotted DNA template.T7 RNA聚合酶无法转录高度打结的DNA模板。
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引用本文的文献

1
Enzymatic properties of plant RNA polymerases : An approach to the study of transcription in plants.植物 RNA 聚合酶的酶学特性:一种研究植物转录的方法。
Plant Mol Biol. 1984 Jul;3(4):217-25. doi: 10.1007/BF00029657.
2
DNA topoisomerase I controls the kinetics of promoter activation and DNA topology in Saccharomyces cerevisiae.DNA拓扑异构酶I控制酿酒酵母中启动子激活的动力学和DNA拓扑结构。
Mol Cell Biol. 1993 Nov;13(11):6702-10. doi: 10.1128/mcb.13.11.6702-6710.1993.
3
Purified Saccharomyces cerevisiae RNA polymerase II interacts homologously with two different promoters as revealed by P1 endonuclease analysis.
Mol Gen Genet. 1986 Aug;204(2):249-57. doi: 10.1007/BF00425506.
4
Structure of RNA polymerase II promoters. Conformational alterations and template properties of circularized Saccharomyces cerevisiae GAL1-GAL10 divergent promoters.RNA聚合酶II启动子的结构。酿酒酵母GAL1 - GAL10双向启动子环化后的构象改变及模板特性。
EMBO J. 1986 Apr;5(4):763-71. doi: 10.1002/j.1460-2075.1986.tb04279.x.