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通过紫外线诱导的DNA-蛋白质交联鉴定SV40感染细胞中与新复制DNA相互作用的蛋白质。

Identification of proteins interacting with newly replicated DNA in SV40-infected cells by UV-induced DNA-protein cross-linking.

作者信息

Tsutsui K, Watanabe S, Katagiri M, Oda T

出版信息

Nucleic Acids Res. 1983 Jul 25;11(14):4793-807. doi: 10.1093/nar/11.14.4793.

DOI:10.1093/nar/11.14.4793
PMID:6308560
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326086/
Abstract

Protein species interacting with newly replicated DNA were analyzed using a photo cross-linking technique. Nascent DNA was labeled in vitro with [alpha-32P]dCTP and BrdUTP in SV40-infected CV-1 cells made permeable with saponin. The labeled cells were then irradiated with UV light (254 nm) and were treated extensively with DNase I. Proteins with radioactive DNA tags were separated by SDS-PAGE and visualized by autoradiography. Among 10-15 proteins which were cross-linked, the proteins with apparent molecular weights of 16.5 K, 44 K, 82 K and those in the 94-140 K region appeared to be associated with newly replicated SV40 DNA. A pulse-chase experiment showed that the 82 K and 94-140 K proteins interacted with new DNA in a relatively localized region close to the replication fork. The 44 K protein was identified as the major viral capsid protein, VP1, using antiserum to SV40 capsid proteins. It was suggested that VP1 binds to nascent DNA shortly after DNA synthesis and migrates into chromatin maturation regions.

摘要

利用光交联技术分析了与新复制DNA相互作用的蛋白质种类。在经皂角苷处理变得通透的感染了SV40的CV-1细胞中,用[α-32P]dCTP和BrdUTP对新生DNA进行体外标记。然后用紫外线(254nm)照射标记的细胞,并用DNase I进行大量处理。带有放射性DNA标签的蛋白质通过SDS-PAGE分离,并通过放射自显影进行可视化。在10 - 15种发生交联的蛋白质中,表观分子量为16.5K、44K、82K以及94 - 140K区域的蛋白质似乎与新复制的SV40 DNA相关。脉冲追踪实验表明,82K和94 - 140K的蛋白质在靠近复制叉的相对局部区域与新DNA相互作用。使用针对SV40衣壳蛋白的抗血清,将44K的蛋白质鉴定为主要的病毒衣壳蛋白VP1。有人提出,VP1在DNA合成后不久就与新生DNA结合,并迁移到染色质成熟区域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/a0a7ed210977/nar00359-0144-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/cb48d5cf6ab4/nar00359-0140-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/c7589de832e3/nar00359-0140-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/96b2a8355841/nar00359-0141-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/a0a7ed210977/nar00359-0144-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/cb48d5cf6ab4/nar00359-0140-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/c7589de832e3/nar00359-0140-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/96b2a8355841/nar00359-0141-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0587/326086/a0a7ed210977/nar00359-0144-a.jpg

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EMBO J. 1984 Mar;3(3):671-6. doi: 10.1002/j.1460-2075.1984.tb01865.x.

本文引用的文献

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The structure of adenovirion chromatin revealed by ultraviolet light-induced cross-linking.紫外线诱导交联揭示的腺病毒颗粒染色质结构
Biochem Biophys Res Commun. 1981 Aug 31;101(4):1318-23. doi: 10.1016/0006-291x(81)91591-6.
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A new method for the isolation of replicative chromatin: selective deposition of histone on both new and old DNA.一种分离复制性染色质的新方法:组蛋白在新旧DNA上的选择性沉积。
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Association of newly synthesized histones with replicating and nonreplicating regions of chromatin.
新合成组蛋白与染色质复制和非复制区域的关联。
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Laser crosslinking of E. coli RNA polymerase and T7 DNA.大肠杆菌RNA聚合酶与T7 DNA的激光交联
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Direct photoaffinity labeling of an allosteric site on subunit protein M1 of mouse ribonucleotide reductase by dTTP.通过dTTP对小鼠核糖核苷酸还原酶亚基蛋白M1上的变构位点进行直接光亲和标记。
Proc Natl Acad Sci U S A. 1982 Jan;79(1):81-5. doi: 10.1073/pnas.79.1.81.
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Dual nature of newly replicated chromatin. Evidence for nucleosomal and non-nucleosomal DNA at the site of native replication forks.新复制染色质的双重性质。天然复制叉位点存在核小体DNA和非核小体DNA的证据。
J Biol Chem. 1981 Nov 25;256(22):11880-6.
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Simian virus 40 encapsidation: characterization of early intermediates.猴病毒40的衣壳化:早期中间体的特征
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Cell. 1982 Aug;30(1):123-30. doi: 10.1016/0092-8674(82)90018-6.
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Ultraviolet light induced preferential cross-linking of histone H3 to deoxyribonucleic acid in chromatin and nuclei of chicken erythrocytes.紫外线诱导鸡红细胞染色质和细胞核中组蛋白H3与脱氧核糖核酸的优先交联。
Biochemistry. 1982 Jul 6;21(14):3419-27. doi: 10.1021/bi00257a027.
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Nucleosome segregation at a defined mammalian chromosomal site.在一个特定的哺乳动物染色体位点上的核小体分离
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