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大肠杆菌谷氧还蛋白的一级结构。与具有氧化还原活性的胱氨酸二硫键/半胱氨酸二硫醇的小蛋白质超家族中的硫氧还蛋白有远缘同源性。

The primary structure of Escherichia coli glutaredoxin. Distant homology with thioredoxins in a superfamily of small proteins with a redox-active cystine disulfide/cysteine dithiol.

作者信息

Höög J O, Jörnvall H, Holmgren A, Carlquist M, Persson M

出版信息

Eur J Biochem. 1983 Oct 17;136(1):223-32. doi: 10.1111/j.1432-1033.1983.tb07730.x.

DOI:10.1111/j.1432-1033.1983.tb07730.x
PMID:6352262
Abstract

An immunosorbent method using antiglutaredoxin-Sepharose was developed for purification of glutaredoxin in high yield from a mutant strain of Escherichia coli K 12 lacking thioredoxin reductase (C 10-17). The primary structure of the protein was determined by analyses of [14C]carboxymethylated glutaredoxin and its proteolytic fragments obtained by digestions with trypsin, clostripain, chymotrypsin and staphylococcal Glu-specific extracellular protease. The single active-center disulfide has the structure-Cys-Pro-Tyr-Cys-, with the half-cystine residues located at positions 11 and 14 in the polypeptide chain. In total the protein was deduced to have 85 residues corresponding to a molecular weight of 9674 for the reduced form of glutaredoxin, making it one of the smallest known enzymes (a glutathione-disulfide transhydrogenase). The half-cystines are identically spaced and similarly positioned in the N-terminal part of the protein when compared with a corresponding functionally active disulfide/dithiol in thioredoxins. Glutaredoxin is also distantly homologous with thioredoxins from phage T4 and E. coli, but extensive differences, even around the redox-active disulfide, distinguish glutaredoxin from the thioredoxins. Allowing for deletions in the glutaredoxin sequence (or insertions in the T4 thioredoxin sequence) at four places, there are identical residues at 25 positions of the 77 compared (= 32% identity). The results establish that glutaredoxin belongs to the same superfamily of small redox proteins as the thioredoxins. The structures are, however, subject to large changes, only four positions have residues identical among all presently analyzed forms. The fluorescence of reduced and oxidized glutaredoxin demonstrates an increase in the quantum yield of the tyrosine emission upon reduction with dithiothreitol. Differences in the spectra support the presence of tyrosine adjacent to the redox-active disulfide bridge. They also confirm that glutaredoxin lacks the disulfide-adjacent tryptophan residues of E. coli thioredoxin. There are known to be great differences between the bacterial E. coli and phage T4 forms of thioredoxin. The glutaredoxin structure is most similar to the phage type, both with respect to size of the polypeptide chain and to actual sequence. From the structural results and the previously known functional similarities it appears possible that the phage thioredoxin may have evolved from an early glutaredoxin gene. The mixed properties are compatible with this conclusion, the superfamily assignment, and the differences in biological activity.

摘要

开发了一种使用抗谷氧还蛋白-琼脂糖凝胶的免疫吸附方法,用于从缺乏硫氧还蛋白还原酶(C 10-17)的大肠杆菌K 12突变株中高产率地纯化谷氧还蛋白。通过对[14C]羧甲基化谷氧还蛋白及其经胰蛋白酶、梭菌蛋白酶、胰凝乳蛋白酶和葡萄球菌Glu特异性细胞外蛋白酶消化得到的蛋白水解片段进行分析,确定了该蛋白质的一级结构。单一活性中心二硫键具有-Cys-Pro-Tyr-Cys-结构,半胱氨酸残基位于多肽链的第11和14位。总的来说,推断该蛋白质有85个残基,对应于还原形式的谷氧还蛋白分子量为9674,使其成为已知最小的酶之一(一种谷胱甘肽-二硫键转氢酶)。与硫氧还蛋白中相应的功能活性二硫键/二硫醇相比,半胱氨酸在蛋白质的N端部分间隔相同且位置相似。谷氧还蛋白与噬菌体T4和大肠杆菌的硫氧还蛋白也有远缘同源性,但即使在氧化还原活性二硫键周围也存在广泛差异,这将谷氧还蛋白与硫氧还蛋白区分开来。考虑到谷氧还蛋白序列中的四个位置缺失(或T4硫氧还蛋白序列中的插入),在77个可比位置中有25个相同残基(= 32% 同一性)。结果表明谷氧还蛋白与硫氧还蛋白属于同一小氧化还原蛋白超家族。然而,这些结构会发生很大变化,目前分析的所有形式中只有四个位置有相同残基。还原型和氧化型谷氧还蛋白的荧光表明,用二硫苏糖醇还原后酪氨酸发射的量子产率增加。光谱差异支持氧化还原活性二硫键桥附近存在酪氨酸。它们还证实谷氧还蛋白缺乏大肠杆菌硫氧还蛋白中二硫键相邻的色氨酸残基。已知大肠杆菌和噬菌体T4形式的硫氧还蛋白之间存在很大差异。谷氧还蛋白结构在多肽链大小和实际序列方面与噬菌体类型最相似。从结构结果和先前已知的功能相似性来看,噬菌体硫氧还蛋白可能是从早期的谷氧还蛋白基因进化而来的。这些混合特性与这一结论、超家族归属以及生物活性差异是相符的。

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