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氨酰核苷酸反应:与遗传密码起源和蛋白质合成相关的研究

Aminoacyl-nucleotide reactions: studies related to the origin of the genetic code and protein synthesis.

作者信息

Mullins D W, Senaratne N, Lacey J C

出版信息

Orig Life. 1984;14(1-4):597-604. doi: 10.1007/BF00933709.

DOI:10.1007/BF00933709
PMID:6462695
Abstract

In the present paper, we report on the effect of pH and carbonate on the hydrolysis rate constants of N-blocked and free aminoacyl adenylate anhydrides. Whereas the hydrolysis of free aminoacyl adenylates seems principally catalyzed by OH-, the hydrolysis of the N-blocked species is also catalyzed by H+, giving this compound a U-shaped hydrolysis vs. pH curve. Furthermore, at pH's less than 8, carbonate has an extreme catalytic effect on the hydrolysis of free aminoacyl-AMP anhydride, but essentially no effect on the hydrolysis of N-blocked aminoacyl-AMP anhydride. Furthermore, the N-blocked aminoacyl-AMP anhydride is a very efficient generator of peptides using free glycine as acceptor. The possible significance of the observations to prebiological peptide synthesis is discussed.

摘要

在本论文中,我们报道了pH值和碳酸盐对N-保护的和游离的氨酰腺苷酸酐水解速率常数的影响。游离氨酰腺苷酸的水解似乎主要由OH-催化,而N-保护物种的水解也由H+催化,使该化合物具有水解速率随pH值变化的U形曲线。此外,在pH值小于8时,碳酸盐对游离氨酰-AMP酐的水解有极大的催化作用,但对N-保护的氨酰-AMP酐的水解基本没有影响。此外,N-保护的氨酰-AMP酐是以游离甘氨酸为受体的非常有效的肽生成剂。讨论了这些观察结果对生命起源前肽合成的可能意义。

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1
Aminoacyl-nucleotide reactions: studies related to the origin of the genetic code and protein synthesis.氨酰核苷酸反应:与遗传密码起源和蛋白质合成相关的研究
Orig Life. 1984;14(1-4):597-604. doi: 10.1007/BF00933709.
2
Hydrolytic properties of phenylalanyl- and N-acetylphenylalanyl adenylate anhydrides.苯丙氨酰和N-乙酰苯丙氨酰腺苷酸酐的水解特性。
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Mixed anhydrides (phosphoric-carboxyl) are also formed in the esterification of 5'-AMP with N-acetylaminoacyl imidazolides: implications regarding the origin of protein synthesis.在5'-腺苷一磷酸与N-乙酰氨基酰咪唑化物的酯化反应中也会形成混合酸酐(磷酸-羧基):关于蛋白质合成起源的启示。
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N-Acetyl-D- and L-esters of 5'-AMP hydrolyze at different rates.5'-AMP的N-乙酰-D-酯和L-酯以不同速率水解。
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Phosphonate analogues of aminoacyl adenylates.氨酰腺苷酸的膦酸酯类似物。
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引用本文的文献

1
Evolutionary importance of the intramolecular pathways of hydrolysis of phosphate ester mixed anhydrides with amino acids and peptides.磷酸酯混合酸酐与氨基酸和肽的分子内水解途径的进化重要性。
Sci Rep. 2014 Dec 11;4:7440. doi: 10.1038/srep07440.

本文引用的文献

1
Genetic code correlations: differential rates of non-enzymatic activation of hydrophobic amino acids by ATP.
Biochem Biophys Res Commun. 1980 Sep 16;96(1):491-7. doi: 10.1016/0006-291x(80)91241-3.
2
Studies of the chemical basis of the origin of protein synthesis: initiation and direction of peptide growth.
J Mol Evol. 1980 Aug;15(4):339-45. doi: 10.1007/BF01733140.
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2H NMR demonstration of amino acid - nucleotide interactions.
Biochem Biophys Res Commun. 1982 Jun 30;106(4):1426-34. doi: 10.1016/0006-291x(82)91273-6.
4
Experimental studies related to the origin of the genetic code and the process of protein synthesis--a review.关于遗传密码起源和蛋白质合成过程的实验研究——综述
Orig Life. 1983 Mar;13(1):3-42. doi: 10.1007/BF00928761.
5
Aminoacyl transfer from adenylate anhydride to the 2'OH groups along the backbone of polyribonucleotides.
Biochem Biophys Res Commun. 1973 Mar 17;51(2):283-91. doi: 10.1016/0006-291x(73)91254-0.
6
Modification of phenylalanyl-tRNA synthetase from Escherichia coli by histidine-specific reagents. Effects on structure and function.用组氨酸特异性试剂对大肠杆菌苯丙氨酰 - tRNA合成酶的修饰。对结构和功能的影响。
Eur J Biochem. 1974 Dec 16;50(1):157-66. doi: 10.1111/j.1432-1033.1974.tb03883.x.
7
Genetic code correlations: amino acids and their anticodon nucleotides.遗传密码相关性:氨基酸及其反密码子核苷酸。
J Mol Evol. 1978 Aug 2;11(3):199-210. doi: 10.1007/BF01734481.
8
Aminoacyl transfer from an adenylate anhydride to polyribonucleotides.氨酰基从腺苷酸酐转移至多聚核糖核苷酸。
J Mol Evol. 1975 Dec 29;6(4):309-20. doi: 10.1007/BF01794637.