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Pattern recognition in several sequences: consensus and alignment.

作者信息

Waterman M S, Arratia R, Galas D J

出版信息

Bull Math Biol. 1984;46(4):515-27. doi: 10.1007/BF02459500.

DOI:10.1007/BF02459500
PMID:6509229
Abstract
摘要

相似文献

1
Pattern recognition in several sequences: consensus and alignment.多个序列中的模式识别:共有序列与比对
Bull Math Biol. 1984;46(4):515-27. doi: 10.1007/BF02459500.
2
Pattern matching between two non-aligned random sequences.两个未对齐随机序列之间的模式匹配。
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3
Staden: using patterns to analyze nucleic acid sequences.斯塔登:利用模式分析核酸序列。
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4
Fractal graphical representation and analysis of DNA and protein sequences.
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5
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6
GCG: pattern recognition.GCG:模式识别。
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7
[Pattern recognition in the computer analysis of nucleotide sequences].
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8
Efficient constrained multiple sequence alignment with performance guarantee.具有性能保证的高效约束多序列比对
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9
FBSA: feature-based sequence alignment technique for very large sequences.FBSA:用于超长序列的基于特征的序列比对技术。
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10
Geometry of circular vectors and pattern recognition of shape of a boundary.圆形向量的几何形状与边界形状的模式识别
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本文引用的文献

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Comparative biosequence metrics.比较生物序列度量
J Mol Evol. 1981;18(1):38-46. doi: 10.1007/BF01733210.
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The anatomy of A-, B-, and Z-DNA.A-DNA、B-DNA和Z-DNA的结构
Science. 1982 Apr 30;216(4545):475-85. doi: 10.1126/science.7071593.
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Use of the 'Perceptron' algorithm to distinguish translational initiation sites in E. coli.使用“感知器”算法区分大肠杆菌中的翻译起始位点。
模拟蛋白质与DNA相互作用的特异性。
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A hybrid method for the exact planted (l, d) motif finding problem and its parallelization.用于精确种植 (l, d) 模式问题的混合方法及其并行化。
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Motif discovery and transcription factor binding sites before and after the next-generation sequencing era. motif 发现和转录因子结合位点在新一代测序时代前后。
Brief Bioinform. 2013 Mar;14(2):225-37. doi: 10.1093/bib/bbs016. Epub 2012 Apr 19.
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An unsupervised method for the extraction of propositional information from text.一种从文本中提取命题信息的无监督方法。
Proc Natl Acad Sci U S A. 2004 Apr 6;101 Suppl 1(Suppl 1):5206-13. doi: 10.1073/pnas.0307758101. Epub 2004 Mar 15.
7
Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA.大肠杆菌K12 DNA中调控蛋白结合位点检测阈值的评估。
Genome Biol. 2002;3(3):RESEARCH0013. doi: 10.1186/gb-2002-3-3-research0013. Epub 2002 Feb 21.
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Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.通过间隔二元组分析在非编码序列中发现调控元件。
Nucleic Acids Res. 2000 Apr 15;28(8):1808-18. doi: 10.1093/nar/28.8.1808.
9
Consensus functions and patterns in molecular sequences.
Bull Math Biol. 1993;55(4):695-713. doi: 10.1007/BF02460669.
10
Discover 1: a new program to search for unusually represented DNA motifs.发现1:一种用于搜索异常富集DNA基序的新程序。
Nucleic Acids Res. 1993 Nov 11;21(22):5152-6. doi: 10.1093/nar/21.22.5152.
Nucleic Acids Res. 1982 May 11;10(9):2997-3011. doi: 10.1093/nar/10.9.2997.
4
Structure of the DNA-binding region of lac repressor inferred from its homology with cro repressor.从乳糖阻遏物与Cro阻遏物的同源性推断出的乳糖阻遏物DNA结合区域的结构。
Proc Natl Acad Sci U S A. 1982 Mar;79(5):1428-32. doi: 10.1073/pnas.79.5.1428.
5
Proposed alpha-helical super-secondary structure associated with protein-dna recognition.与蛋白质-DNA识别相关的拟议α-螺旋超二级结构。
J Mol Biol. 1982 Aug 25;159(4):745-51. doi: 10.1016/0022-2836(82)90111-5.
6
Base sequence and helix structure variation in B and A DNA.B型和A型DNA的碱基序列及螺旋结构变异
J Mol Biol. 1983 May 25;166(3):419-41. doi: 10.1016/s0022-2836(83)80093-x.
7
Organization and expression of eucaryotic split genes coding for proteins.编码蛋白质的真核生物断裂基因的组织与表达。
Annu Rev Biochem. 1981;50:349-83. doi: 10.1146/annurev.bi.50.070181.002025.
8
Rapid searches for complex patterns in biological molecules.快速搜索生物分子中的复杂模式。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):263-80. doi: 10.1093/nar/12.1part1.263.
9
Compilation and analysis of Escherichia coli promoter DNA sequences.大肠杆菌启动子DNA序列的汇编与分析
Nucleic Acids Res. 1983 Apr 25;11(8):2237-55. doi: 10.1093/nar/11.8.2237.
10
Regulatory pattern identification in nucleic acid sequences.核酸序列中的调控模式识别
Nucleic Acids Res. 1983 Apr 11;11(7):2221-31. doi: 10.1093/nar/11.7.2221.