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噬菌体T4 DNA聚合酶的3'-5'校对核酸外切酶受到其他T4 DNA复制蛋白的刺激。

The 3'-5' proofreading exonuclease of bacteriophage T4 DNA polymerase is stimulated by other T4 DNA replication proteins.

作者信息

Bedinger P, Alberts B M

出版信息

J Biol Chem. 1983 Aug 25;258(16):9649-56.

PMID:6604051
Abstract

The bacteriophage T4 DNA polymerase has an intrinsic 3'-5' proofreading exonuclease activity that plays a central role in determining the fidelity of T4 DNA replication. In order to monitor this activity, we have measured the rate at which the polymerase decreases the size of a double-stranded DNA substrate in the absence of deoxyribonucleoside triphosphates. With this assay, we find that the addition of the polymerase accessory proteins, 45 protein and 44/62 protein, increases the rate at which the polymerase-associated exonuclease digests the DNA substrate 3- to 4-fold. This stimulation requires the continuous hydrolysis of ATP catalyzed by the accessory protein complex. When added alone, the T4 helix-destabilizing protein, 32 protein, inhibits the exonuclease rate at high concentrations (greater than 100 micrograms/ml), while stimulating about 3-fold at low concentrations. The 32 protein and the accessory proteins together increase the exonuclease rate 8- to 10-fold above that found for the polymerase alone. The bacteriophage T7 DNA polymerase displays a similar 3'-5' exonuclease activity, but this exonuclease is not stimulated by any of the T4 replication proteins. It therefore appears that specific protein-protein interactions are involved.

摘要

噬菌体T4 DNA聚合酶具有内在的3'-5'校对核酸外切酶活性,这在决定T4 DNA复制的保真度方面起着核心作用。为了监测这种活性,我们测量了在没有脱氧核糖核苷三磷酸的情况下,聚合酶使双链DNA底物大小减小的速率。通过这种测定方法,我们发现添加聚合酶辅助蛋白45蛋白和44/62蛋白后,与聚合酶相关的核酸外切酶消化DNA底物的速率提高了3至4倍。这种刺激需要辅助蛋白复合物催化ATP的持续水解。单独添加时,T4解旋不稳定蛋白32蛋白在高浓度(大于100微克/毫升)时会抑制核酸外切酶的速率,而在低浓度时会刺激约3倍。32蛋白和辅助蛋白一起使核酸外切酶的速率比单独的聚合酶提高了8至10倍。噬菌体T7 DNA聚合酶表现出类似的3'-5'核酸外切酶活性,但这种核酸外切酶不受任何T4复制蛋白的刺激。因此,似乎涉及特定的蛋白质-蛋白质相互作用。

相似文献

1
The 3'-5' proofreading exonuclease of bacteriophage T4 DNA polymerase is stimulated by other T4 DNA replication proteins.噬菌体T4 DNA聚合酶的3'-5'校对核酸外切酶受到其他T4 DNA复制蛋白的刺激。
J Biol Chem. 1983 Aug 25;258(16):9649-56.
2
Processive proofreading is intrinsic to T4 DNA polymerase.进行性校对是T4 DNA聚合酶固有的特性。
J Biol Chem. 1992 Jul 15;267(20):14157-66.
3
Effect of accessory proteins on T4 DNA polymerase replication fidelity.辅助蛋白对T4 DNA聚合酶复制保真度的影响。
J Mol Biol. 1998 Apr 24;278(1):135-46. doi: 10.1006/jmbi.1998.1676.
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Stimulation of the processivity of the DNA polymerase of bacteriophage T4 by the polymerase accessory proteins. The role of ATP hydrolysis.噬菌体T4的聚合酶辅助蛋白对DNA聚合酶持续合成能力的刺激作用。ATP水解的作用。
J Biol Chem. 1991 Jan 25;266(3):1830-40.
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The complex of T4 bacteriophage gene 44 and 62 replication proteins forms an ATPase that is stimulated by DNA and by T4 gene 45 protein.T4噬菌体基因44和62复制蛋白的复合物形成一种ATP酶,该酶受到DNA和T4基因45蛋白的刺激。
J Mol Biol. 1984 Aug 5;177(2):279-93. doi: 10.1016/0022-2836(84)90457-1.
6
Trypsin cleavage in the COOH terminus of the bacteriophage T4 gene 41 DNA helicase alters the primase-helicase activities of the T4 replication complex in vitro.在噬菌体T4基因41 DNA解旋酶的COOH末端进行胰蛋白酶切割会改变体外T4复制复合物的引发酶-解旋酶活性。
J Biol Chem. 1989 Mar 15;264(8):4732-9.
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Protein-DNA cross-linking demonstrates stepwise ATP-dependent assembly of T4 DNA polymerase and its accessory proteins on the primer-template.
Cell. 1991 Apr 19;65(2):249-58. doi: 10.1016/0092-8674(91)90159-v.
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Kinetic characterization of the polymerase and exonuclease activities of the gene 43 protein of bacteriophage T4.噬菌体T4基因43蛋白的聚合酶和核酸外切酶活性的动力学特性
Biochemistry. 1992 Nov 17;31(45):10984-94. doi: 10.1021/bi00160a007.
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Two types of replication proteins increase the rate at which T4 DNA polymerase traverses the helical regions in a single-stranded DNA template.两种复制蛋白提高了T4 DNA聚合酶在单链DNA模板中穿越螺旋区域的速率。
J Biol Chem. 1981 Apr 25;256(8):4087-94.
10
Structural and enzymatic studies of the T4 DNA replication system. II. ATPase properties of the polymerase accessory protein complex.T4 DNA复制系统的结构与酶学研究。II. 聚合酶辅助蛋白复合物的ATP酶特性。
J Biol Chem. 1989 Jul 25;264(21):12717-29.

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Multiple ATP-dependent steps in RNA polymerase II promoter melting and initiation.
RNA聚合酶II启动子解链和起始过程中的多个ATP依赖步骤。
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Assembly of a functional replication complex without ATP hydrolysis: a direct interaction of bacteriophage T4 gp45 with T4 DNA polymerase.无需ATP水解即可组装功能性复制复合体:噬菌体T4 gp45与T4 DNA聚合酶的直接相互作用。
Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3211-5. doi: 10.1073/pnas.90.8.3211.
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Further characterization of the interaction between the Epstein-Barr virus DNA polymerase catalytic subunit and its accessory subunit with regard to the 3'-to-5' exonucleolytic activity and stability of initiation complex at primer terminus.关于爱泼斯坦-巴尔病毒DNA聚合酶催化亚基与其辅助亚基之间在3'至5'核酸外切酶活性以及引物末端起始复合物稳定性方面相互作用的进一步表征。
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