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Interactions of the histone octamer with single-stranded DNA. Sedimentation analysis and low-angle X-ray diffraction.

作者信息

Caffarelli E, De Santis P, Leoni L, Savino M, Trotta E

出版信息

Biochim Biophys Acta. 1983 Mar 10;739(2):235-43. doi: 10.1016/0167-4781(83)90034-9.

DOI:10.1016/0167-4781(83)90034-9
PMID:6824675
Abstract

A complex between 140-160 nucleotide single-stranded DNA and the octamer of histones was formed and analyzed by electron microscopy and X-ray low angle diffraction. The morphology of the complex is very similar to that of the nucleosome; the diffraction pattern appears less defined than for chromatin showing broader maxima in the same positions. These results strongly suggest that this particle has a geometry very similar to that of the fundamental subunit of chromatin. The possibility of artifacts due to renaturation reaction promoted by histones is ruled out by the analysis of the complex with S1 nuclease and by the formation of a 'nucleosome like' particle using poly(dT) instead of DNA. Association of the histone octamer with either the 140-160 nucleotide single-stranded DNA or the 140-160 bp double-stranded DNA was evaluated at different histone/DNA input ratios. In both cases, the formation of the complex appears to be regulated by comparable association constants, and in both cases the trend of the complexation reaction in function of the temperature is almost the same. These results suggest that an alternative binding of the histone octamer to double-stranded or to single-stranded DNA requires low energy charge and may be involved in the processes of replication and transcription of the 'active chromatin'.

摘要

相似文献

1
Interactions of the histone octamer with single-stranded DNA. Sedimentation analysis and low-angle X-ray diffraction.
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引用本文的文献

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Nucleosome-like, Single-stranded DNA (ssDNA)-Histone Octamer Complexes and the Implication for DNA Double Strand Break Repair.核小体样单链DNA(ssDNA)-组蛋白八聚体复合物及其对DNA双链断裂修复的意义
J Biol Chem. 2017 Mar 31;292(13):5271-5281. doi: 10.1074/jbc.M117.776369. Epub 2017 Feb 15.
2
Histone dosage regulates DNA damage sensitivity in a checkpoint-independent manner by the homologous recombination pathway.组蛋白剂量通过同源重组途径以不依赖于检验点的方式调节 DNA 损伤敏感性。
Nucleic Acids Res. 2012 Oct;40(19):9604-20. doi: 10.1093/nar/gks722. Epub 2012 Jul 31.
3
Nucleosome "phasing" and cruciform structures in circular supercoiled pBR322 DNA.
环状超螺旋pBR322 DNA中的核小体“定相”和十字形结构。
Cell Biophys. 1984 Mar;6(1):23-31. doi: 10.1007/BF02788578.
4
Influence of DNA topology and histone tails in nucleosome organization on pBR322 DNA.DNA拓扑结构和核小体组织中的组蛋白尾部对pBR322 DNA的影响。
Nucleic Acids Res. 1991 Aug 25;19(16):4543-9. doi: 10.1093/nar/19.16.4543.