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大鼠肝脏染色质的无嘌呤/无嘧啶内切脱氧核糖核酸酶

The apurinic/apyrimidinic endodeoxyribonuclease of rat-liver chromatin.

作者信息

César R, Verly W G

出版信息

Eur J Biochem. 1983 Jan 1;129(3):509-17. doi: 10.1111/j.1432-1033.1983.tb07077.x.

DOI:10.1111/j.1432-1033.1983.tb07077.x
PMID:6825667
Abstract

The extract from rat liver chromatin contains two apurinic/apyrimidinic (AP) endodeoxyribonucleases named 0.2 M and 0.3 M isozymes according to the phosphate concentration necessary to elute them from an hydroxyapatite column. The 0.3 M isozyme is the main and perhaps the only chromatin AP endodeoxyribonuclease in the living cell. This 0.3 M isozyme was purified by successive chromatographies on hydroxyapatite, phosphocellulose, heparin-Sepharose and alkylated-depurinated DNA-cellulose. It has a molecular weight of approximately 39000; its optimum pH is around 8.0; it needs Mg2+ or Mn2+ to be active and the optimum concentration for Mg2+ is between 5 mM and 10 mM. The 0.3 M isozyme has no action on intact DNA strands or on alkylated sites; it cuts the phosphodiester bridge which is the immediate neighbour of the AP site on its 5' side leaving 3'-hydroxyl and 5'-phosphate ends. It has no associated exonuclease activity. To hydrolyze the phosphoester bond near the AP site, the enzyme makes a close contact with three base residues in the large groove of the DNA molecule.

摘要

大鼠肝脏染色质提取物含有两种无嘌呤/无嘧啶(AP)内切脱氧核糖核酸酶,根据从羟基磷灰石柱上洗脱它们所需的磷酸盐浓度,分别命名为0.2M和0.3M同工酶。0.3M同工酶是活细胞中主要的,也许是唯一的染色质AP内切脱氧核糖核酸酶。这种0.3M同工酶通过在羟基磷灰石、磷酸纤维素、肝素-琼脂糖和烷基化-脱嘌呤DNA-纤维素上连续色谱法进行纯化。它的分子量约为39000;其最适pH值约为8.0;它需要Mg2+或Mn2+才有活性,Mg2+的最适浓度在5mM至10mM之间。0.3M同工酶对完整的DNA链或烷基化位点没有作用;它切割磷酸二酯桥,该桥在其5'侧与AP位点直接相邻,留下3'-羟基和5'-磷酸末端。它没有相关的外切核酸酶活性。为了水解AP位点附近的磷酸酯键,该酶与DNA分子大沟中的三个碱基残基紧密接触。

相似文献

1
The apurinic/apyrimidinic endodeoxyribonuclease of rat-liver chromatin.大鼠肝脏染色质的无嘌呤/无嘧啶内切脱氧核糖核酸酶
Eur J Biochem. 1983 Jan 1;129(3):509-17. doi: 10.1111/j.1432-1033.1983.tb07077.x.
2
Localization of the phosphoester bond hydrolyzed by the major apurinic/apyrmidinic endodeoxyribonuclease from rat-liver chromatin.
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Purification and properties of the major apurinic/apyrimidinic endodeoxyribonuclease of rat-liver chromatin.大鼠肝脏染色质主要脱嘌呤/脱嘧啶内切脱氧核糖核酸酶的纯化及性质
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Repair of depurinated DNA with enzymes from rat liver chromatin.用大鼠肝脏染色质中的酶修复脱嘌呤DNA。
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Repair of AP sites in DNA.DNA中脱嘌呤嘧啶位点的修复。
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Purification and some properties of apurinic/apyrimidinic DNA endonucleases in rat liver.
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Cellular localization of the apurinic/apyrimidinic endodeoxyribonucleases in rat liver.大鼠肝脏中脱嘌呤/脱嘧啶内切脱氧核糖核酸酶的细胞定位
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[Specific for apurine-apyrimidine DNA endodeoxyribonuclease from the rat brain].
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引用本文的文献

1
Repair of depurinated DNA with enzymes from rat liver chromatin.用大鼠肝脏染色质中的酶修复脱嘌呤DNA。
Biochem J. 1984 May 15;220(1):133-7. doi: 10.1042/bj2200133.
2
T4 DNA ligase can seal a nick in double-stranded DNA limited by a 5'-phosphorylated base-free deoxyribose residue.T4 DNA连接酶能够封闭双链DNA中由5'-磷酸化的无碱基脱氧核糖残基所限定的切口。
Nucleic Acids Res. 1983 Nov 25;11(22):8103-9. doi: 10.1093/nar/11.22.8103.
3
Deoxyribonuclease IV from rat liver chromatin and the excision of apurinic sites from depurinated DNA.
来自大鼠肝脏染色质的脱氧核糖核酸酶IV与脱嘌呤DNA中无嘌呤位点的切除
Biochem J. 1985 Jan 15;225(2):535-42. doi: 10.1042/bj2250535.
4
Importance of thiols in the repair mechanisms of DNA containing AP (apurinic or apyrimidinic) sites.硫醇在含有AP(脱嘌呤或脱嘧啶)位点的DNA修复机制中的重要性。
Nucleic Acids Res. 1988 Oct 25;16(20):9489-96. doi: 10.1093/nar/16.20.9489.
5
Mechanism of DNA strand nicking at apurinic/apyrimidinic sites by Escherichia coli [formamidopyrimidine]DNA glycosylase.大肠杆菌[甲酰胺嘧啶]DNA糖基化酶在无嘌呤/无嘧啶位点切割DNA链的机制。
Biochem J. 1989 Sep 1;262(2):581-9. doi: 10.1042/bj2620581.
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The use of thioglycolate to distinguish between 3' AP (apurinic/apyrimidinic) endonucleases and AP lyases.使用硫代乙醇酸盐区分3' 脱嘌呤/脱嘧啶(AP)核酸内切酶和AP裂解酶。
Nucleic Acids Res. 1989 Aug 11;17(15):6269-82. doi: 10.1093/nar/17.15.6269.
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Bacteriophage-T4 and Micrococcus luteus UV endonucleases are not endonucleases but beta-elimination and sometimes beta delta-elimination catalysts.噬菌体T4和藤黄微球菌紫外线内切核酸酶并非内切核酸酶,而是β-消除酶,有时还是βδ-消除酶催化剂。
Biochem J. 1989 May 1;259(3):751-9. doi: 10.1042/bj2590751.
8
Possible roles of beta-elimination and delta-elimination reactions in the repair of DNA containing AP (apurinic/apyrimidinic) sites in mammalian cells.β-消除反应和δ-消除反应在哺乳动物细胞中含AP(脱嘌呤/脱嘧啶)位点的DNA修复中的可能作用。
Biochem J. 1988 Jul 15;253(2):553-9. doi: 10.1042/bj2530553.
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Purification and amino-terminal amino acid sequence of an apurinic/apyrimidinic endonuclease from calf thymus.小牛胸腺脱嘌呤/脱嘧啶内切核酸酶的纯化及氨基末端氨基酸序列
Nucleic Acids Res. 1987 Jul 24;15(14):5529-44. doi: 10.1093/nar/15.14.5529.
10
Action of intact AP (apurinic/apyrimidinic) sites and AP sites associated with breaks on the transcription of T7 coliphage DNA by Escherichia coli RNA polymerase.完整的脱嘌呤/脱嘧啶(AP)位点以及与断裂相关的AP位点对大肠杆菌RNA聚合酶转录T7噬菌体DNA的作用。
Biochem J. 1985 Jul 1;229(1):173-81. doi: 10.1042/bj2290173.