嗜酸嗜热栖热菌中甲硫氨酸转运核糖核酸（tRNAMMet）的核苷酸序列。
The nucleotide sequence of the tRNAMMet from the archaebacterium Thermoplasma acidophilum.
作者信息
Kilpatrick M W, Walker R T
出版信息
Nucleic Acids Res. 1981 Sep 11;9(17):4387-90. doi: 10.1093/nar/9.17.4387.
Abstract
Using in vitro labelling techniques, a tRNAMMet from Thermoplasma acidophilum, a member of the Archaebacteriae, has been shown to have the sequence: pGCCGGG Gs4UGGCUCANCUGGAGGAGC m2(2)GCCGGACmUCAUt6AAUCCGGAGGUCUCGGG psi psi CmGAUCCCCGAUCCCGGCACCAOH. Despite the small genome size of this non-parasitic organism, eight modified nucleosides are present, one of which is typically eubacterial, one of which is typically eukaryotic and some of which appear to be unique to the archaebacteria. There is no close sequence homology between this tRNA and that of any other methionine tRNA so far sequenced (less than 70%) but it has almost 90% homology with the nucleotide sequence proposed by Eigen and Oswatitsch for the ancestral quasi-species.
摘要
运用体外标记技术，已证明嗜热栖热菌（古细菌的一种）的甲硫氨酸转运核糖核酸（tRNAMMet）具有如下序列：pGCCGGG Gs4UGGCUCANCUGGAGGAGC m2(2)GCCGGACmUCAUt6AAUCCGGAGGUCUCGGG ψψCmGAUCCCCGAUCCCGGCACCAOH。尽管这种非寄生生物的基因组规模较小，但其中存在8种修饰核苷，其中一种典型地存在于真细菌中，一种典型地存在于真核生物中，还有一些似乎是古细菌所特有的。到目前为止，该转运核糖核酸与已测序的任何其他甲硫氨酸转运核糖核酸之间不存在紧密的序列同源性（低于70%），但它与艾根和奥斯瓦蒂施提出的祖先准种的核苷酸序列具有近90%的同源性。
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本文引用的文献
1
Compilation of tRNA sequences.转运RNA序列的汇编。
Nucleic Acids Res. 1981 Jan 10;9(1):r1-23.
2
Transfer-RNA: the early adaptor.转运核糖核酸：早期的衔接分子。
Naturwissenschaften. 1981 May;68(5):217-28. doi: 10.1007/BF01047323.
3
The phylogeny of prokaryotes.原核生物的系统发育。
Science. 1980 Jul 25;209(4455):457-63. doi: 10.1126/science.6771870.
4
An improved direct RNA sequence method; its application to Vicia faba 5.8S ribosomal RNA.一种改进的直接RNA测序方法；其在蚕豆5.8S核糖体RNA中的应用。
Nucleic Acids Res. 1980 Mar 25;8(6):1259-72. doi: 10.1093/nar/8.6.1259.
5
A different approach to RNA sequencing.一种不同的RNA测序方法。
Nature. 1978 Jul 6;274(5666):87-9. doi: 10.1038/274087a0.
6
Mapping adenines, guanines, and pyrimidines in RNA.绘制RNA中的腺嘌呤、鸟嘌呤和嘧啶。
Nucleic Acids Res. 1977 Aug;4(8):2527-38. doi: 10.1093/nar/4.8.2527.
7
The nucleotide sequence of formylmethionine tRNA from Mycoplasma mycoides sp. capri.来自山羊支原体丝状亚种的甲酰甲硫氨酸转运核糖核酸的核苷酸序列。
Nucleic Acids Res. 1978 Jan;5(1):57-70. doi: 10.1093/nar/5.1.57.
8
Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs.体外32P标记在非放射性tRNA序列分析中的应用。
Methods Enzymol. 1979;59:58-109. doi: 10.1016/0076-6879(79)59072-7.
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