• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

硫代磷酸酯修饰的双链DNA和合成“小基因”的稳定性及功能有效性

Stability and functional effectiveness of phosphorothioate modified duplex DNA and synthetic 'mini-genes'.

作者信息

Ciafrè S A, Rinaldi M, Gasparini P, Seripa D, Bisceglia L, Zelante L, Farace M G, Fazio V M

机构信息

Istituto Medicina Sperimentale, CNR, Rome, Italy.

出版信息

Nucleic Acids Res. 1995 Oct 25;23(20):4134-42. doi: 10.1093/nar/23.20.4134.

DOI:10.1093/nar/23.20.4134
PMID:7479077
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC307355/
Abstract

Several gene transfer techniques that employ 'naked DNA' molecules have recently been developed and numerous gene therapy protocols that make use of 'naked-DNA' have been proposed. We studied the possibility of enhancing the stability of 'naked DNA vectors' and thus also gene transfer and expression efficiencies, by constructing phosphorothioate (PS-) double strand DNA molecules and functional transcription units. We first synthesized short PS-double strand DNA molecules by the annealing of two complementary, 35 nt long, oligonucleotides. The accessibility of DNA modifying enzymes to this molecule was significantly decreased: T4-ligase and kinase activity were respectively reduced up to 1/2 and to 1/6, as compared to the normal phosphodiester molecule. Nucleolytic stability was increased either to purified enzymes (DNase I and Bal31) or to incubations in fresh serum, cell culture medium or in muscle protein extract. Phosphorothioate end-capped complete eukaryotic transcription units (obtained by Taq polymerase amplification with PS-primers) were not significantly protected from nucleolytic attack. On the contrary, synthetic transcription units, 'mini genes', obtained by Taq amplification with 1, 2 or 3 PS-dNTP substitutions, were resistant to DNase I and Bal31 nucleolytic activity. Transcription efficiency, driven by the T7 promoter, was 96.5, 95 and 33.5% (respectively with 1, 2 or 3 substitutions), as compared to the normal phosphodiester molecules.

摘要

最近已经开发了几种使用“裸DNA”分子的基因转移技术,并且已经提出了许多利用“裸DNA”的基因治疗方案。我们通过构建硫代磷酸酯(PS-)双链DNA分子和功能性转录单元,研究了提高“裸DNA载体”稳定性的可能性,从而也提高了基因转移和表达效率。我们首先通过两条互补的35个核苷酸长的寡核苷酸退火合成了短的PS-双链DNA分子。DNA修饰酶对该分子的可及性显著降低:与正常磷酸二酯分子相比,T4连接酶和激酶活性分别降低至1/2和1/6。无论是对纯化的酶(DNase I和Bal31)还是在新鲜血清、细胞培养基或肌肉蛋白提取物中的孵育,核酸酶稳定性都有所提高。硫代磷酸酯封端的完整真核转录单元(通过用PS-引物进行Taq聚合酶扩增获得)对核酸酶攻击没有显著的保护作用。相反,通过用1、2或3个PS-dNTP替代物进行Taq扩增获得的合成转录单元“微型基因”对DNase I和Bal31核酸酶活性具有抗性。与正常磷酸二酯分子相比,由T7启动子驱动的转录效率分别为96.5%、95%和33.5%(分别有1、2或3个替代物)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/facdc93ca0ee/nar00020-0136-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/9fefa82270d2/nar00020-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/46b22d18303d/nar00020-0135-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/ca8c20ccb2a2/nar00020-0136-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/facdc93ca0ee/nar00020-0136-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/9fefa82270d2/nar00020-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/46b22d18303d/nar00020-0135-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/ca8c20ccb2a2/nar00020-0136-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8403/307355/facdc93ca0ee/nar00020-0136-b.jpg

相似文献

1
Stability and functional effectiveness of phosphorothioate modified duplex DNA and synthetic 'mini-genes'.硫代磷酸酯修饰的双链DNA和合成“小基因”的稳定性及功能有效性
Nucleic Acids Res. 1995 Oct 25;23(20):4134-42. doi: 10.1093/nar/23.20.4134.
2
Comparison of the molecular influences of NO-induced lesions in DNA strands on the reactivity of polynucleotide kinases, DNA ligases and DNA polymerases.比较 NO 诱导的 DNA 链分子损伤对多核苷酸激酶、DNA 连接酶和 DNA 聚合酶反应性的影响。
J Biochem. 2010 May;147(5):697-703. doi: 10.1093/jb/mvq003. Epub 2010 Jan 22.
3
Repair of DNA strand gaps and nicks containing 3'-phosphate and 5'-hydroxyl termini by purified mammalian enzymes.利用纯化的哺乳动物酶修复含有3'-磷酸和5'-羟基末端的DNA链缺口和切口。
Nucleic Acids Res. 1998 Oct 1;26(19):4395-400. doi: 10.1093/nar/26.19.4395.
4
Evaluation of 15 polymerases and phosphorothioate primer modification for detection of UV-induced C:G to T:A mutations by allele-specific PCR.通过等位基因特异性PCR评估15种聚合酶和硫代磷酸酯引物修饰用于检测紫外线诱导的C:G到T:A突变
Photochem Photobiol. 2004 May;79(5):461-9. doi: 10.1562/2003-11-12-ra.1.
5
Phosphorothioate primers improve the amplification of DNA sequences by DNA polymerases with proofreading activity.硫代磷酸酯引物可提高具有校对活性的DNA聚合酶对DNA序列的扩增能力。
Nucleic Acids Res. 1992 Jul 25;20(14):3551-4. doi: 10.1093/nar/20.14.3551.
6
A simple and convenient sticky/blunt-end ligation method for fusion gene construction.一种用于构建融合基因的简单便捷的粘性/平端连接方法。
Biochem Genet. 2015 Apr;53(1-3):42-8. doi: 10.1007/s10528-015-9669-x. Epub 2015 Mar 28.
7
PCR using a thermostable polymerase with 3' to 5' exonuclease activity generates blunt products suitable for direct cloning.使用具有3'至5'核酸外切酶活性的热稳定聚合酶进行聚合酶链反应(PCR)可产生适用于直接克隆的平端产物。
Nucleic Acids Res. 1992 Jan 11;20(1):144. doi: 10.1093/nar/20.1.144.
8
End-damage-specific proteins facilitate recruitment or stability of X-ray cross-complementing protein 1 at the sites of DNA single-strand break repair.终末损伤特异性蛋白促进X射线交叉互补蛋白1在DNA单链断裂修复位点的募集或稳定性。
FEBS J. 2005 Nov;272(22):5753-63. doi: 10.1111/j.1742-4658.2005.04962.x.
9
Joining RNA molecules with T4 DNA ligase.使用T4 DNA连接酶连接RNA分子。
Methods Mol Biol. 1999;118:11-9. doi: 10.1385/1-59259-676-2:11.
10
Optimal conditions to use Pfu exo(-) DNA polymerase for highly efficient ligation-mediated polymerase chain reaction protocols.在高效连接介导的聚合酶链反应方案中使用Pfu exo(-) DNA聚合酶的最佳条件。
Nucleic Acids Res. 2001 Aug 15;29(16):E83. doi: 10.1093/nar/29.16.e83.

引用本文的文献

1
Increasing Oligonucleotide Sequencing Information and Throughput with Ion Mobility Spectrometry-Mass Spectrometry.利用离子淌度光谱-质谱技术增加寡核苷酸测序信息及通量
J Am Soc Mass Spectrom. 2025 Jul 2;36(7):1493-1502. doi: 10.1021/jasms.5c00083. Epub 2025 Jun 9.
2
Single-Stranded Nucleic Acids Regulate TLR3/4/7 Activation through Interference with Clathrin-Mediated Endocytosis.单链核酸通过干扰网格蛋白介导的内吞作用来调节 TLR3/4/7 的激活。
Sci Rep. 2018 Oct 26;8(1):15841. doi: 10.1038/s41598-018-33960-4.
3
Inhibition of Poly(A)-binding protein with a synthetic RNA mimic reduces pain sensitization in mice.

本文引用的文献

1
Direct gene transfer into skeletal muscle in vivo: factors affecting efficiency of transfer and stability of expression.体内将基因直接导入骨骼肌:影响转移效率和表达稳定性的因素。
Hum Gene Ther. 1993 Apr;4(2):151-9. doi: 10.1089/hum.1993.4.2-151.
2
Heterologous protection against influenza by injection of DNA encoding a viral protein.通过注射编码病毒蛋白的DNA实现对流感的异源保护。
Science. 1993 Mar 19;259(5102):1745-9. doi: 10.1126/science.8456302.
3
Gene therapy by intramuscular injection of plasmid DNA: studies on firefly luciferase gene expression in mice.
用合成RNA模拟物抑制聚腺苷酸结合蛋白可减轻小鼠的疼痛敏感性。
Nat Commun. 2018 Jan 2;9(1):10. doi: 10.1038/s41467-017-02449-5.
4
Monitoring integrity and localization of modified single-stranded RNA oligonucleotides using ultrasensitive fluorescence methods.使用超灵敏荧光方法监测修饰的单链RNA寡核苷酸的完整性和定位。
PLoS One. 2017 Mar 9;12(3):e0173401. doi: 10.1371/journal.pone.0173401. eCollection 2017.
5
Towards XNA nanotechnology: new materials from synthetic genetic polymers.迈向XNA纳米技术:合成基因聚合物制成的新材料
Trends Biotechnol. 2014 Jun;32(6):321-8. doi: 10.1016/j.tibtech.2014.03.010. Epub 2014 Apr 15.
6
Construction and selection of bead-bound combinatorial oligonucleoside phosphorothioate and phosphorodithioate aptamer libraries designed for rapid PCR-based sequencing.用于基于PCR的快速测序的珠结合组合寡核苷酸硫代磷酸酯和二硫代磷酸酯适配体文库的构建与筛选。
Nucleic Acids Res. 2002 Dec 1;30(23):e132. doi: 10.1093/nar/gnf132.
通过肌肉注射质粒DNA进行基因治疗:小鼠萤火虫荧光素酶基因表达的研究
Hum Gene Ther. 1993 Aug;4(4):419-31. doi: 10.1089/hum.1993.4.4-419.
4
Enhanced gene delivery and mechanism studies with a novel series of cationic lipid formulations.使用一系列新型阳离子脂质制剂增强基因递送及机制研究。
J Biol Chem. 1994 Jan 28;269(4):2550-61.
5
Plasmid DNA is superior to viral vectors for direct gene transfer into adult mouse skeletal muscle.在将基因直接导入成年小鼠骨骼肌方面,质粒DNA比病毒载体更具优势。
Hum Gene Ther. 1993 Dec;4(6):733-40. doi: 10.1089/hum.1993.4.6-733.
6
Accumulation of human apolipoprotein-E in rat plasma after in vivo intramuscular injection of naked DNA.体内肌肉注射裸DNA后大鼠血浆中人载脂蛋白E的蓄积
Biochem Biophys Res Commun. 1994 Apr 15;200(1):298-305. doi: 10.1006/bbrc.1994.1448.
7
Dystrophin expression improves myofiber survival in mdx muscle following intramuscular plasmid DNA injection.
Hum Mol Genet. 1993 Dec;2(12):2055-61. doi: 10.1093/hmg/2.12.2055.
8
Quantitative determination of phosphorothioate-modified oligodeoxyribonucleotide persistence.硫代磷酸酯修饰的寡脱氧核糖核苷酸持久性的定量测定。
Biotechniques. 1994 Aug;17(2):266-7.
9
Non-viral gene therapy.非病毒基因治疗。
Curr Opin Biotechnol. 1994 Dec;5(6):626-36. doi: 10.1016/0958-1669(94)90085-x.
10
A DNA fragment with an alpha-phosphorothioate nucleotide at one end is asymmetrically blocked from digestion by exonuclease III and can be replicated in vivo.一端带有α-硫代磷酸酯核苷酸的DNA片段在体外核酸外切酶III的作用下会被不对称地阻断消化,并且能够在体内进行复制。
Proc Natl Acad Sci U S A. 1981 Dec;78(12):7350-4. doi: 10.1073/pnas.78.12.7350.