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细胞角蛋白17基因的隐蔽增强子元件激活沉默的人类细胞角蛋白17假基因启动子区域

Activation of the silent human cytokeratin 17 pseudogene-promoter region by cryptic enhancer elements of the cytokeratin 17 gene.

作者信息

Troyanovsky S M, Leube R E

机构信息

Division of Cell Biology, German Cancer Research Center, Heidelberg, Germany.

出版信息

Eur J Biochem. 1994 Oct 1;225(1):61-9. doi: 10.1111/j.1432-1033.1994.00061.x.

Abstract

We have previously described the three loci CK-CA, CK-CB and CK-CC in the human genome that contain clustered type-I cytokeratin genes and reported the complete nucleic acid sequences of the functional cytokeratin 17 gene located in CK-CA and two closely related pseudogenes present in CK-CB and CK-CC [Troyanovsky, S.M., Leube, R.E. & Franke, W.W. (1992) Eur. J. Cell Biol. 59, 127-137]. By nucleic acid sequence analysis, we now show that extensive similarities between the functional gene and the pseudogenes exist in the 5'-upstream region. However, despite the high degree of nucleic acid identity (94%), only the 5'-upstream region of the functional gene was able to induce significant transcriptional activity in transfected cells of epithelial origin. Using chimeric upstream regions consisting of different fragments from the pseudogene and the functional gene, we made the surprising observation that cis elements in the proximal 5'-upstream region of the pseudogene promoter can cooperate with distal enhancer elements of the functional gene to induce strong chloramphenicol-O-acetyltransferase activity in transfected HeLa cells. A major site in the proximal upstream region was identified by deoxyribonuclease protection experiments to be necessary for this cooperative effect. The structure and properties of this element were further analysed by transfection of different chloramphenicol-O-acetyltransferase gene constructs, and by nucleic acid sequence comparison to corresponding regions of the related cytokeratins 14 and 16. It is concluded that the upstream regions identified in this study contribute to the strong expression of the human cytokeratin 17 gene in a coordinated fashion.

摘要

我们之前已经描述了人类基因组中的三个基因座CK-CA、CK-CB和CK-CC,它们包含成簇的I型细胞角蛋白基因,并报道了位于CK-CA中的功能性细胞角蛋白17基因以及存在于CK-CB和CK-CC中的两个密切相关的假基因的完整核酸序列[Troyanovsky, S.M., Leube, R.E. & Franke, W.W. (1992) Eur. J. Cell Biol. 59, 127 - 137]。通过核酸序列分析,我们现在表明功能性基因和假基因在5'-上游区域存在广泛的相似性。然而,尽管核酸同一性程度很高(94%),但只有功能性基因的5'-上游区域能够在上皮来源的转染细胞中诱导显著的转录活性。使用由假基因和功能性基因的不同片段组成的嵌合上游区域,我们有了一个惊人的发现,即假基因启动子近端5'-上游区域的顺式元件可以与功能性基因的远端增强子元件协同作用,在转染的HeLa细胞中诱导强烈的氯霉素-O-乙酰转移酶活性。通过脱氧核糖核酸酶保护实验确定近端上游区域的一个主要位点对于这种协同效应是必需的。通过转染不同的氯霉素-O-乙酰转移酶基因构建体以及与相关细胞角蛋白14和16的相应区域进行核酸序列比较,进一步分析了该元件的结构和特性。得出的结论是,本研究中鉴定的上游区域以协调的方式有助于人类细胞角蛋白17基因的强表达。

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