• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

天蓝色链霉菌A3(2)肽链释放因子2的特性:保守的一级结构但无移码调节

Properties of peptide chain release factor 2 from Streptomyces coelicolor A3(2): conserved primary structure but no frameshift regulation.

作者信息

Ogawara H, Urabe H, Ohtaki R, Nakamura Y

机构信息

Department of Biochemistry, Meiji College of Pharmacy, Tokyo, Japan.

出版信息

J Bacteriol. 1995 Sep;177(18):5342-5. doi: 10.1128/jb.177.18.5342-5345.1995.

DOI:10.1128/jb.177.18.5342-5345.1995
PMID:7545157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC177330/
Abstract

A gene was cloned from Streptomyces coelicolor A3(2). It encodes a protein of 368 amino acid residues with a high degree of similarity to prokaryotic release factor 2. However, it has neither an internal stop codon nor the Shine-Dalgarno-like sequence immediately upstream of the assumed frameshift position. The gene is expressed and functional in Escherichia coli as peptide chain release factor 2. The transcription start site is at or adjacent to the translational start site. The size of the mRNA detected by hybridization suggests that the gene (prfB) is monocistronic in S. coelicolor A3(2). However, about 80 bp upstream of the gene there is an operon which is composed of two genes encoding eukaryotic-type serine/threonine kinases.

摘要

从天蓝色链霉菌A3(2)中克隆出一个基因。它编码一个由368个氨基酸残基组成的蛋白质,与原核生物释放因子2高度相似。然而,它既没有内部终止密码子,也没有在假定移码位置上游紧邻的类似Shine-Dalgarno序列。该基因在大肠杆菌中作为肽链释放因子2表达且具有功能。转录起始位点在翻译起始位点处或其附近。通过杂交检测到的mRNA大小表明该基因(prfB)在天蓝色链霉菌A3(2)中是单顺反子的。然而,在该基因上游约80 bp处有一个操纵子,它由两个编码真核型丝氨酸/苏氨酸激酶的基因组成。

相似文献

1
Properties of peptide chain release factor 2 from Streptomyces coelicolor A3(2): conserved primary structure but no frameshift regulation.天蓝色链霉菌A3(2)肽链释放因子2的特性:保守的一级结构但无移码调节
J Bacteriol. 1995 Sep;177(18):5342-5. doi: 10.1128/jb.177.18.5342-5345.1995.
2
Cloning, sequencing and expression of serine/threonine kinase-encoding genes from Streptomyces coelicolor A3(2).来自天蓝色链霉菌A3(2)的丝氨酸/苏氨酸激酶编码基因的克隆、测序及表达
Gene. 1995 Feb 3;153(1):99-104. doi: 10.1016/0378-1119(94)00789-u.
3
Cloning and sequencing of the dnaK locus in Streptomyces coelicolor A3(2).天蓝色链霉菌A3(2)中dnaK基因座的克隆与测序
DNA Seq. 1996;6(3):179-84. doi: 10.3109/10425179609010207.
4
Cloning of the conserved regulatory operon by its aerial mycelium-inducing activity in an amfR mutant of Streptomyces griseus.通过其在灰色链霉菌amfR突变体中诱导气生菌丝的活性克隆保守调控操纵子。
Gene. 2003 Mar 13;306:79-89. doi: 10.1016/s0378-1119(03)00405-0.
5
Nucleotide sequence of afsB, a pleiotropic gene involved in secondary metabolism in Streptomyces coelicolor A3(2) and "Streptomyces lividans".天蓝色链霉菌A3(2)和“变铅青链霉菌”中参与次生代谢的多效性基因afsB的核苷酸序列。
J Bacteriol. 1986 Oct;168(1):257-69. doi: 10.1128/jb.168.1.257-269.1986.
6
A putative two-component regulatory system involved in secondary metabolism in Streptomyces spp.一种假定参与链霉菌属次生代谢的双组分调节系统。
J Bacteriol. 1992 Dec;174(23):7585-94. doi: 10.1128/jb.174.23.7585-7594.1992.
7
Chromosomal location and structure of the operon encoding peptide-chain-release factor 2 of Escherichia coli.大肠杆菌肽链释放因子2编码操纵子的染色体定位与结构
Proc Natl Acad Sci U S A. 1988 Aug;85(15):5620-4. doi: 10.1073/pnas.85.15.5620.
8
The stress-response sigma factor sigma(H) controls the expression of ssgB, a homologue of the sporulation-specific cell division gene ssgA, in Streptomyces coelicolor A3(2).应激反应σ因子σ(H)控制天蓝色链霉菌A3(2)中ssgB的表达,ssgB是芽孢形成特异性细胞分裂基因ssgA的同源物。
Mol Genet Genomics. 2002 Jun;267(4):536-43. doi: 10.1007/s00438-002-0687-0. Epub 2002 May 18.
9
Purification of a malonyltransferase from Streptomyces coelicolor A3(2) and analysis of its genetic determinant.天蓝色链霉菌A3(2)丙二酰转移酶的纯化及其遗传决定因素分析。
J Bacteriol. 1995 Jul;177(14):3946-52. doi: 10.1128/jb.177.14.3946-3952.1995.
10
Frameshifting in the synthesis of Escherichia coli polypeptide chain release factor two on eukaryotic ribosomes.大肠杆菌多肽链释放因子2在真核核糖体上合成时的移码现象。
Eur J Biochem. 1989 Dec 22;186(3):515-21. doi: 10.1111/j.1432-1033.1989.tb15237.x.

引用本文的文献

1
A peptide chain release factor 2 affects the stability of UGA-containing transcripts in Arabidopsis chloroplasts.肽链释放因子2影响拟南芥叶绿体中含UGA转录本的稳定性。
Plant Cell. 2002 Dec;14(12):3255-69. doi: 10.1105/tpc.006809.
2
Suppression of TGA mutations in the Bacillus subtilis spoIIR gene by prfB mutations.枯草芽孢杆菌spoIIR基因中TGA突变被prfB突变抑制。
J Bacteriol. 1998 Aug;180(16):4166-70. doi: 10.1128/JB.180.16.4166-4170.1998.
3
Does disparate occurrence of autoregulatory programmed frameshifting in decoding the release factor 2 gene reflect an ancient origin with loss in independent lineages?在解码释放因子2基因过程中,自调控程序性移码的不同发生率是否反映了其古老起源以及在独立谱系中的丢失?
J Bacteriol. 1998 Jul;180(13):3462-6. doi: 10.1128/JB.180.13.3462-3466.1998.
4
Is the in-frame termination signal of the Escherichia coli release factor-2 frameshift site weakened by a particularly poor context?大肠杆菌释放因子-2移码位点的读框内终止信号是否因特定的不良上下文而减弱?
Nucleic Acids Res. 1996 Jul 15;24(14):2673-8. doi: 10.1093/nar/24.14.2673.
5
Conserved motifs in prokaryotic and eukaryotic polypeptide release factors: tRNA-protein mimicry hypothesis.原核生物和真核生物多肽释放因子中的保守基序:tRNA-蛋白质模拟假说。
Proc Natl Acad Sci U S A. 1996 May 28;93(11):5443-8. doi: 10.1073/pnas.93.11.5443.

本文引用的文献

1
Cloning, sequencing and expression of serine/threonine kinase-encoding genes from Streptomyces coelicolor A3(2).来自天蓝色链霉菌A3(2)的丝氨酸/苏氨酸激酶编码基因的克隆、测序及表达
Gene. 1995 Feb 3;153(1):99-104. doi: 10.1016/0378-1119(94)00789-u.
2
Temporal analysis of general control of amino acid biosynthesis in Saccharomyces cerevisiae: role of positive regulatory genes in initiation and maintenance of mRNA derepression.酿酒酵母氨基酸生物合成一般控制的时间分析:正调控基因在mRNA去阻遏起始和维持中的作用。
Mol Cell Biol. 1984 Mar;4(3):520-8. doi: 10.1128/mcb.4.3.520-528.1984.
3
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
4
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.在噬菌体T4头部组装过程中结构蛋白的切割
Nature. 1970 Aug 15;227(5259):680-5. doi: 10.1038/227680a0.
5
Release factors differing in specificity for terminator codons.对终止密码子具有不同特异性的释放因子。
Proc Natl Acad Sci U S A. 1968 Oct;61(2):768-74. doi: 10.1073/pnas.61.2.768.
6
Improved estimation of secondary structure in ribonucleic acids.核糖核酸二级结构的改进估计。
Nat New Biol. 1973 Nov 14;246(150):40-1. doi: 10.1038/newbio246040a0.
7
Bacterial peptide chain release factors: conserved primary structure and possible frameshift regulation of release factor 2.细菌肽链释放因子:释放因子2的保守一级结构及可能的移码调控
Proc Natl Acad Sci U S A. 1985 Jun;82(11):3616-20. doi: 10.1073/pnas.82.11.3616.
8
Improved tools for biological sequence comparison.用于生物序列比较的改进工具。
Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444-8. doi: 10.1073/pnas.85.8.2444.
9
Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2.利用tRNA抑制子探究大肠杆菌释放因子2的调控机制。
J Mol Biol. 1988 Sep 5;203(1):75-83. doi: 10.1016/0022-2836(88)90092-7.
10
Conditionally lethal and recessive UGA-suppressor mutations in the prfB gene encoding peptide chain release factor 2 of Escherichia coli.大肠杆菌中编码肽链释放因子2的prfB基因的条件致死性和隐性UGA抑制突变。
J Bacteriol. 1988 Nov;170(11):5378-81. doi: 10.1128/jb.170.11.5378-5381.1988.