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一种新的果蝇布扎蒂逆转座子奥斯瓦尔多的高转座率。

High transposition rates of Osvaldo, a new Drosophila buzzatii retrotransposon.

作者信息

Labrador M, Fontdevila A

机构信息

Departament de Genètica i de Microbiología, Universitat Autònoma de Barcelona, Bellaterra, Spain.

出版信息

Mol Gen Genet. 1994 Dec 15;245(6):661-74. doi: 10.1007/BF00297273.

Abstract

Transposition of a new Drosophila retrotransposon was investigated. Total genomic Southern analysis and polytene in situ hybridizations in D. buzzatii strains and other related species using a 6 kb D. buzzatii clone (cDb314) showed a dispersed, repetitive DNA pattern, suggesting that this clone contains a transposable element (TE). We have sequenced the cDb314 clone and demonstrated that it contains all the conserved protein sequences and motifs typical of retrovirus-related sequences. Although cDb314 does not include the complete TE, the protein sequence alignment demonstrates that it includes a defective copy of a new long terminal repeat (LTR) retrotransposon, related to the gypsy family, which we have named Osvaldo. Using a D. buzzatii inbred line in which all insertion sites are known, we have measured Osvaldo transposition rates in hybrids between this D. buzzatii line and its sibling species D. koepferae. The results show that Osvaldo transposes in bursts at high rate, both in the D. buzzatii inbred line and in species hybrids.

摘要

对一种新的果蝇逆转录转座子的转座情况进行了研究。使用一个6kb的巴氏果蝇克隆(cDb314),对巴氏果蝇品系及其他相关物种进行了全基因组Southern分析和多线染色体原位杂交,结果显示出一种分散的、重复性的DNA模式,这表明该克隆含有一个转座元件(TE)。我们对cDb314克隆进行了测序,并证明它包含了逆转录病毒相关序列典型的所有保守蛋白质序列和基序。虽然cDb314并不包含完整的转座元件,但蛋白质序列比对表明它包含一个与gypsy家族相关的新的长末端重复(LTR)逆转录转座子的缺陷拷贝,我们将其命名为奥斯瓦尔多(Osvaldo)。利用一个所有插入位点都已知的巴氏果蝇近交系,我们测量了该巴氏果蝇品系与其姊妹物种科氏果蝇(D. koepferae)杂交后代中奥斯瓦尔多的转座率。结果表明,奥斯瓦尔多在巴氏果蝇近交系和物种杂交后代中均以高频率爆发式转座。

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