• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酵母前体mRNA剪接第二步中Slu7p和Prp17p的特征及功能排序

Characterization and functional ordering of Slu7p and Prp17p during the second step of pre-mRNA splicing in yeast.

作者信息

Jones M H, Frank D N, Guthrie C

机构信息

Department of Biochemistry and Biophysics, University of California, San Francisco 94143, USA.

出版信息

Proc Natl Acad Sci U S A. 1995 Oct 10;92(21):9687-91. doi: 10.1073/pnas.92.21.9687.

DOI:10.1073/pnas.92.21.9687
PMID:7568198
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC40867/
Abstract

Temperature-sensitive alleles in four genes (slu7-1, prp16-2, prp17-1, and prp18-1) are known to confer a specific block to the second chemical step of pre-mRNA splicing in vivo in the yeast Saccharomyces cerevisiae. Previous studies showed that Prp16p and Prp18p are required solely for the second step in vitro. The RNA-dependent ATPase, Prp16p, functions at a stage in splicing when ATP is required, whereas Prp18p functions at an ATP-independent stage. Here we use immunodepletion to show that the roles of Slu7p and Prp17p are also confined to the second step of splicing. We find that extracts depleted of Prp17p require both Prp17p and ATP for slicing complementation, whereas extracts depleted of Slu7p require only the addition of Slu7p. These different ATP requirements suggest that Prp16p and Prp17p function before Prp18p and Slu7p. Although SLU7 encodes an essential gene product, we find that a null allele of prp17 is temperature-sensitive for growth and has a partial splicing defect in vitro. Finally, high-copy suppression experiments indicate functional interactions between PRP16 and PRP17, PRP16 and SLU7, and SLU7 and PRP18. Taken together, the results suggest that these four factors may function within a multi-component complex that has both an ATP-dependent and an ATP-independent role in the second step of pre-mRNA splicing.

摘要

已知四个基因(slu7-1、prp16-2、prp17-1和prp18-1)中的温度敏感等位基因会在酿酒酵母体内对前体mRNA剪接的第二步化学反应产生特定阻碍。先前的研究表明,Prp16p和Prp18p仅在体外剪接的第二步中是必需的。RNA依赖性ATP酶Prp16p在剪接过程中需要ATP的阶段发挥作用,而Prp18p在不依赖ATP的阶段发挥作用。在这里,我们使用免疫耗竭法来表明Slu7p和Prp17p的作用也局限于剪接的第二步。我们发现,耗尽Prp17p的提取物在剪接互补时既需要Prp17p也需要ATP,而耗尽Slu7p的提取物只需要添加Slu7p。这些不同的ATP需求表明Prp16p和Prp17p在Prp18p和Slu7p之前发挥作用。尽管SLU7编码一种必需的基因产物,但我们发现prp17的无效等位基因对生长是温度敏感的,并且在体外有部分剪接缺陷。最后,高拷贝抑制实验表明PRP16与PRP17、PRP16与SLU7以及SLU7与PRP18之间存在功能相互作用。综上所述,结果表明这四个因子可能在一个多组分复合物中发挥作用,该复合物在前体mRNA剪接的第二步中既具有依赖ATP的作用,也具有不依赖ATP的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c20/40867/04da43c6d3e5/pnas01499-0270-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c20/40867/d4d03d010af5/pnas01499-0269-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c20/40867/04da43c6d3e5/pnas01499-0270-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c20/40867/d4d03d010af5/pnas01499-0269-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c20/40867/04da43c6d3e5/pnas01499-0270-a.jpg

相似文献

1
Characterization and functional ordering of Slu7p and Prp17p during the second step of pre-mRNA splicing in yeast.酵母前体mRNA剪接第二步中Slu7p和Prp17p的特征及功能排序
Proc Natl Acad Sci U S A. 1995 Oct 10;92(21):9687-91. doi: 10.1073/pnas.92.21.9687.
2
Prp16p, Slu7p, and Prp8p interact with the 3' splice site in two distinct stages during the second catalytic step of pre-mRNA splicing.在mRNA前体剪接的第二步催化过程中,Prp16p、Slu7p和Prp8p在两个不同阶段与3'剪接位点相互作用。
RNA. 1995 Aug;1(6):584-97.
3
Functional conservation of the human homolog of the yeast pre-mRNA splicing factor Prp17p.酵母前体mRNA剪接因子Prp17p的人类同源物的功能保守性
J Biol Chem. 1998 Dec 4;273(49):32771-5. doi: 10.1074/jbc.273.49.32771.
4
How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing.Slu7和Prp18如何在酵母前体mRNA剪接的第二步中协同作用。
RNA. 2002 Aug;8(8):1068-77. doi: 10.1017/s1355838202022033.
5
Human homologs of yeast prp16 and prp17 reveal conservation of the mechanism for catalytic step II of pre-mRNA splicing.酵母prp16和prp17的人类同源物揭示了前体mRNA剪接催化步骤II机制的保守性。
EMBO J. 1998 Apr 1;17(7):2095-106. doi: 10.1093/emboj/17.7.2095.
6
Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3' splice site.酵母前体mRNA剪接中对SLU7的需求由分支点与3'剪接位点之间的距离决定。
RNA. 1996 Jul;2(7):707-17.
7
SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing.SLU7和一种新活性SSF1在酵母前体mRNA剪接的PRP16依赖性步骤中发挥作用。
EMBO J. 1995 Aug 15;14(16):4001-9. doi: 10.1002/j.1460-2075.1995.tb00071.x.
8
Genetic studies of the PRP17 gene of Saccharomyces cerevisiae: a domain essential for function maps to a nonconserved region of the protein.酿酒酵母PRP17基因的遗传学研究:功能所必需的一个结构域定位于该蛋白质的一个非保守区域。
Genetics. 1996 May;143(1):45-55. doi: 10.1093/genetics/143.1.45.
9
Synthetic lethality of yeast slt mutations with U2 small nuclear RNA mutations suggests functional interactions between U2 and U5 snRNPs that are important for both steps of pre-mRNA splicing.酵母slt突变与U2小核RNA突变的合成致死性表明U2和U5小核核糖核蛋白颗粒之间存在功能相互作用,这对前体mRNA剪接的两个步骤都很重要。
Mol Cell Biol. 1998 Apr;18(4):2055-66. doi: 10.1128/MCB.18.4.2055.
10
Extensive genetic interactions between PRP8 and PRP17/CDC40, two yeast genes involved in pre-mRNA splicing and cell cycle progression.PRP8与PRP17/CDC40(两个参与前体mRNA剪接和细胞周期进程的酵母基因)之间存在广泛的遗传相互作用。
Genetics. 2000 Jan;154(1):61-71. doi: 10.1093/genetics/154.1.61.

引用本文的文献

1
New mechanistic insights into Prp22-mediated exon ligation and mRNA release.对Prp22介导的外显子连接和mRNA释放的新机制见解。
Nucleic Acids Res. 2025 Aug 27;53(16). doi: 10.1093/nar/gkaf823.
2
Structure of a step II catalytically activated spliceosome from Chlamydomonas reinhardtii.莱茵衣藻第二步催化激活剪接体的结构
EMBO J. 2025 Feb;44(4):975-990. doi: 10.1038/s44318-024-00274-3. Epub 2024 Oct 16.
3
The Arabidopsis cyclophilin CYP18-1 facilitates PRP18 dephosphorylation and the splicing of introns retained under heat stress.

本文引用的文献

1
A U5 small nuclear ribonucleoprotein particle protein involved only in the second step of pre-mRNA splicing in Saccharomyces cerevisiae.一种仅参与酿酒酵母前体信使核糖核酸剪接第二步的U5小核核糖核蛋白颗粒蛋白。
Mol Cell Biol. 1993 May;13(5):2959-70. doi: 10.1128/mcb.13.5.2959-2970.1993.
2
Stages in the second reaction of pre-mRNA splicing: the final step is ATP independent.前体mRNA剪接的第二步反应阶段:最后一步不依赖ATP。
Genes Dev. 1993 Feb;7(2):320-9. doi: 10.1101/gad.7.2.320.
3
A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediates.
拟南芥环肽酶 CYP18-1 促进 PRP18 去磷酸化和热胁迫下内含子的剪接。
Plant Cell. 2022 May 24;34(6):2383-2403. doi: 10.1093/plcell/koac084.
4
Genome-Wide Identification and Functional Characterization of CCHC-Type Zinc Finger Genes in .. 中CCHC型锌指基因的全基因组鉴定与功能表征
J Fungi (Basel). 2021 Nov 10;7(11):947. doi: 10.3390/jof7110947.
5
Structural basis for conformational equilibrium of the catalytic spliceosome.催化剪接体构象平衡的结构基础。
Mol Cell. 2021 Apr 1;81(7):1439-1452.e9. doi: 10.1016/j.molcel.2021.02.021. Epub 2021 Mar 10.
6
Genome-wide analysis of CCHC-type zinc finger (ZCCHC) proteins in yeast, Arabidopsis, and humans.酵母、拟南芥和人类中 CCHC 型锌指(ZCCHC)蛋白的全基因组分析。
Cell Mol Life Sci. 2020 Oct;77(20):3991-4014. doi: 10.1007/s00018-020-03518-7. Epub 2020 Apr 18.
7
Molecular Mechanisms of pre-mRNA Splicing through Structural Biology of the Spliceosome.通过剪接体的结构生物学研究前体 mRNA 剪接的分子机制。
Cold Spring Harb Perspect Biol. 2019 Jan 2;11(1):a032409. doi: 10.1101/cshperspect.a032409.
8
Cwc23 is a component of the NTR complex and functions to stabilize Ntr1 and facilitate disassembly of spliceosome intermediates.Cwc23 是 NTR 复合物的一个组成部分,其功能是稳定 Ntr1 并促进剪接体中间产物的解体。
Nucleic Acids Res. 2018 Apr 20;46(7):3764-3773. doi: 10.1093/nar/gky052.
9
Cryo-EM structure of a human spliceosome activated for step 2 of splicing.冷冻电镜结构解析人类剪接体在剪接步骤 2 的激活状态。
Nature. 2017 Feb 16;542(7641):318-323. doi: 10.1038/nature21079. Epub 2017 Jan 11.
10
A central role of Cwc25 in spliceosome dynamics during the catalytic phase of pre-mRNA splicing.Cwc25在mRNA前体剪接催化阶段的剪接体动力学中起核心作用。
RNA. 2017 Apr;23(4):546-556. doi: 10.1261/rna.059204.116. Epub 2017 Jan 5.
一种增强mRNA剪接保真度的机制:RNA依赖性ATP酶Prp16控制异常套索状中间体的废弃途径的使用。
Cell. 1993 Jul 2;73(7):1377-91. doi: 10.1016/0092-8674(93)90363-u.
4
The ancient regulatory-protein family of WD-repeat proteins.WD重复蛋白的古老调节蛋白家族。
Nature. 1994 Sep 22;371(6495):297-300. doi: 10.1038/371297a0.
5
A novel set of spliceosome-associated proteins and the essential splicing factor PSF bind stably to pre-mRNA prior to catalytic step II of the splicing reaction.一组新的剪接体相关蛋白和必需剪接因子PSF在剪接反应的催化步骤II之前与前体mRNA稳定结合。
EMBO J. 1994 Jul 15;13(14):3356-67. doi: 10.1002/j.1460-2075.1994.tb06638.x.
6
A novel role for a U5 snRNP protein in 3' splice site selection.U5小核核糖核蛋白(snRNP)蛋白在3'剪接位点选择中的新作用。
Genes Dev. 1995 Apr 1;9(7):855-68. doi: 10.1101/gad.9.7.855.
7
Dynamic RNA-RNA interactions in the spliceosome.剪接体中的动态RNA-RNA相互作用。
Annu Rev Genet. 1994;28:1-26. doi: 10.1146/annurev.ge.28.120194.000245.
8
Yeast mRNA splicing in vitro.体外酵母mRNA剪接
J Biol Chem. 1985 Nov 25;260(27):14780-92.
9
Isolation and characterization of pre-mRNA splicing mutants of Saccharomyces cerevisiae.酿酒酵母前体mRNA剪接突变体的分离与鉴定
Genes Dev. 1989 Aug;3(8):1206-16. doi: 10.1101/gad.3.8.1206.
10
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.一种用于在酿酒酵母中高效操作DNA的穿梭载体和酵母宿主菌株系统。
Genetics. 1989 May;122(1):19-27. doi: 10.1093/genetics/122.1.19.