• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

工程化酪氨酸转氨酶中交替的精氨酸调节底物特异性

Alternating arginine-modulated substrate specificity in an engineered tyrosine aminotransferase.

作者信息

Malashkevich V N, Onuffer J J, Kirsch J F, Jansonius J N

机构信息

Department of Structural Biology, University of Basel, Switzerland.

出版信息

Nat Struct Biol. 1995 Jul;2(7):548-53. doi: 10.1038/nsb0795-548.

DOI:10.1038/nsb0795-548
PMID:7664122
Abstract

Mutation of six residues of Escherichia coli aspartate aminotransferase results in substantial acquisition of the transamination properties of tyrosine amino-transferase without loss of aspartate transaminase activity. X-ray crystallographic analysis of key inhibitor complexes of the hexamutant reveals the structural basis for this substrate selectivity. It appears that tyrosine aminotransferase achieves nearly equal affinities for a wide range of amino acids by an unusual conformational switch. An active-site arginine residue either shifts its position to electrostatically interact with charged substrates or moves aside to allow access of aromatic ligands.

摘要

大肠杆菌天冬氨酸转氨酶六个残基的突变导致在不丧失天冬氨酸转氨酶活性的情况下,大量获得酪氨酸转氨酶的转氨特性。对该六突变体关键抑制剂复合物的X射线晶体学分析揭示了这种底物选择性的结构基础。酪氨酸转氨酶似乎通过一种不寻常的构象转换对多种氨基酸实现了几乎相等的亲和力。活性位点的一个精氨酸残基要么移动其位置以与带电荷的底物进行静电相互作用,要么移到一旁以便芳香族配体能够进入。

相似文献

1
Alternating arginine-modulated substrate specificity in an engineered tyrosine aminotransferase.工程化酪氨酸转氨酶中交替的精氨酸调节底物特异性
Nat Struct Biol. 1995 Jul;2(7):548-53. doi: 10.1038/nsb0795-548.
2
Redesign of the substrate specificity of Escherichia coli aspartate aminotransferase to that of Escherichia coli tyrosine aminotransferase by homology modeling and site-directed mutagenesis.通过同源建模和定点诱变将大肠杆菌天冬氨酸转氨酶的底物特异性重新设计为大肠杆菌酪氨酸转氨酶的底物特异性。
Protein Sci. 1995 Sep;4(9):1750-7. doi: 10.1002/pro.5560040910.
3
Significant improvement to the catalytic properties of aspartate aminotransferase: role of hydrophobic and charged residues in the substrate binding pocket.天冬氨酸转氨酶催化特性的显著改善:底物结合口袋中疏水和带电残基的作用。
Biochemistry. 1994 Jan 11;33(1):90-7. doi: 10.1021/bi00167a012.
4
The use of natural and unnatural amino acid substrates to define the substrate specificity differences of Escherichia coli aspartate and tyrosine aminotransferases.利用天然和非天然氨基酸底物来界定大肠杆菌天冬氨酸转氨酶和酪氨酸转氨酶的底物特异性差异。
Protein Sci. 1995 Sep;4(9):1743-9. doi: 10.1002/pro.5560040909.
5
Structure and mechanism of a cysteine sulfinate desulfinase engineered on the aspartate aminotransferase scaffold.基于天冬氨酸转氨酶支架构建的半胱氨酸亚磺酸盐脱亚磺基酶的结构与机制
Biochim Biophys Acta. 2012 Feb;1824(2):339-49. doi: 10.1016/j.bbapap.2011.10.016. Epub 2011 Nov 23.
6
Directed evolution relieves product inhibition and confers in vivo function to a rationally designed tyrosine aminotransferase.定向进化缓解了产物抑制,并赋予了合理设计的酪氨酸转氨酶体内功能。
Protein Sci. 2004 Mar;13(3):763-72. doi: 10.1110/ps.03117204. Epub 2004 Feb 6.
7
Activity and structure of the active-site mutants R386Y and R386F of Escherichia coli aspartate aminotransferase.
Biochemistry. 1991 Feb 19;30(7):1980-5. doi: 10.1021/bi00221a035.
8
Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase.直接进化酶中底物特异性的变窄:天冬氨酸转氨酶的A293D突变体
Biochemistry. 2004 Oct 12;43(40):12780-7. doi: 10.1021/bi0487544.
9
Tyr225 in aspartate aminotransferase: contribution of the hydrogen bond between Tyr225 and coenzyme to the catalytic reaction.天冬氨酸转氨酶中的酪氨酸225:酪氨酸225与辅酶之间的氢键对催化反应的贡献。
J Biochem. 1991 Apr;109(4):570-6. doi: 10.1093/oxfordjournals.jbchem.a123421.
10
Crystallization and preliminary crystallographic analysis of the Escherichia coli tyrosine aminotransferase.
Acta Crystallogr D Biol Crystallogr. 1999 Aug;55(Pt 8):1474-7. doi: 10.1107/s0907444999006630.

引用本文的文献

1
Biocatalysis enables the scalable conversion of biobased furans into various furfurylamines.生物催化能够实现生物基呋喃的规模化转化,生成各种糠基胺。
Nat Commun. 2024 Jul 29;15(1):6371. doi: 10.1038/s41467-024-50637-x.
2
Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.计算重塑酶构象景观以改变底物选择性。
Nat Commun. 2023 Sep 28;14(1):6058. doi: 10.1038/s41467-023-41762-0.
3
Aspartate aminotransferase Rv3722c governs aspartate-dependent nitrogen metabolism in Mycobacterium tuberculosis.
天冬氨酸氨基转移酶 Rv3722c 调控结核分枝杆菌中天冬氨酸依赖型氮代谢。
Nat Commun. 2020 Apr 23;11(1):1960. doi: 10.1038/s41467-020-15876-8.
4
Structural basis of substrate recognition by a novel thermostable (S)-enantioselective ω-transaminase from Thermomicrobium roseum.一株嗜热玫瑰微菌新型热稳定(S)-对映选择性ω-转氨酶的底物识别结构基础。
Sci Rep. 2019 May 6;9(1):6958. doi: 10.1038/s41598-019-43490-2.
5
Quantum Chemical Study of Dual-Substrate Recognition in ω-Transaminase.ω-转氨酶中双底物识别的量子化学研究
ACS Omega. 2017 Mar 31;2(3):890-898. doi: 10.1021/acsomega.6b00376. Epub 2017 Mar 14.
6
Mechanistic and Evolutionary Insights from Comparative Enzymology of Phosphomonoesterases and Phosphodiesterases across the Alkaline Phosphatase Superfamily.从碱性磷酸酶超家族中磷酸单酯酶和磷酸二酯酶的比较酶学到其机制和进化见解。
J Am Chem Soc. 2016 Nov 2;138(43):14273-14287. doi: 10.1021/jacs.6b06186. Epub 2016 Oct 20.
7
Crystal structures of Mycobacterium tuberculosis HspAT and ArAT reveal structural basis of their distinct substrate specificities.结核分枝杆菌HspAT和ArAT的晶体结构揭示了它们不同底物特异性的结构基础。
Sci Rep. 2016 Jan 7;6:18880. doi: 10.1038/srep18880.
8
Active-Site Engineering of ω-Transaminase for Production of Unnatural Amino Acids Carrying a Side Chain Bulkier than an Ethyl Substituent.用于生产侧链比乙基庞大的非天然氨基酸的ω-转氨酶的活性位点工程
Appl Environ Microbiol. 2015 Oct;81(20):6994-7002. doi: 10.1128/AEM.01533-15. Epub 2015 Jul 31.
9
Functional evolution of PLP-dependent enzymes based on active-site structural similarities.基于活性位点结构相似性的PLP依赖性酶的功能进化
Proteins. 2014 Oct;82(10):2597-608. doi: 10.1002/prot.24624. Epub 2014 Jun 20.
10
Janus: prediction and ranking of mutations required for functional interconversion of enzymes.Janus:酶功能互变所需突变的预测和排序。
J Mol Biol. 2013 Apr 26;425(8):1378-89. doi: 10.1016/j.jmb.2013.01.034. Epub 2013 Feb 6.