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利用天然和非天然氨基酸底物来界定大肠杆菌天冬氨酸转氨酶和酪氨酸转氨酶的底物特异性差异。

The use of natural and unnatural amino acid substrates to define the substrate specificity differences of Escherichia coli aspartate and tyrosine aminotransferases.

作者信息

Onuffer J J, Ton B T, Klement I, Kirsch J F

机构信息

Department of Molecular and Cell Biology, University of California, Berkeley 94720, USA.

出版信息

Protein Sci. 1995 Sep;4(9):1743-9. doi: 10.1002/pro.5560040909.

Abstract

The tyrosine (eTATase) and aspartate (eAATase) aminotransferases of Escherichia coli transaminate diacarboxylic amino acids with similar rate constants. However, eTATase exhibits approximately 10(2)-10(4)-fold higher second-order rate constants for the transamination of aromatic amino acids than does eAATase. A series of natural and unnatural amino acid substrates was used to quantitate specificity differences for these two highly related enzymes. A general trend toward lower transamination activity with increasing side-chain length (extending from aspartate to glutamate to alpha-aminoadipate) is observed for both enzymes. This result suggests that dicarboxylate ligands associate with the two highly related enzymes in a similar manner. The high reactivity of the enzymes with L-Asp and L-Glu can be attributed to an ion pair interaction between the side-chain carboxylate of the amino acid substrate and the guanidino group of the active site residue Arg 292 that is common to both enzymes. A strong linear correlation between side-chain hydrophobicity and transamination rate constants obtains for n-alkyl side-chain amino substrates with eTATase, but not for eAATase. The present kinetic data support a model in which eAATase contains one binding mode for all classes of substrate, whereas the active site of eTATase allows an additional mode that has increased affinity for hydrophobic amino acid.

摘要

大肠杆菌的酪氨酸(eTATase)和天冬氨酸(eAATase)转氨酶对二羧酸氨基酸进行转氨作用时,其速率常数相似。然而,与eAATase相比,eTATase对芳香族氨基酸进行转氨作用时表现出大约10²-10⁴倍更高的二级速率常数。使用了一系列天然和非天然氨基酸底物来定量这两种高度相关酶的特异性差异。对于这两种酶,都观察到随着侧链长度增加(从天冬氨酸延伸到谷氨酸再到α-氨基己二酸)转氨活性降低的总体趋势。这一结果表明二羧酸配体以相似的方式与这两种高度相关的酶结合。酶与L-天冬氨酸和L-谷氨酸的高反应性可归因于氨基酸底物侧链羧酸盐与两种酶共有的活性位点残基Arg 292的胍基之间的离子对相互作用。对于带有eTATase的正烷基侧链氨基底物,侧链疏水性与转氨速率常数之间存在很强的线性相关性,但对于eAATase则不存在。目前的动力学数据支持这样一种模型,即eAATase对所有类型的底物都包含一种结合模式,而eTATase的活性位点允许一种对疏水性氨基酸具有更高亲和力的额外模式。

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本文引用的文献

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