• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

RuvC-霍利迪连接体复合物的结构分析揭示了一个展开的连接体。

Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction.

作者信息

Bennett R J, West S C

机构信息

Imperial Cancer Research Fund, Clare Hall Laboratories South Mimms, Herts, UK.

出版信息

J Mol Biol. 1995 Sep 15;252(2):213-26. doi: 10.1006/jmbi.1995.0489.

DOI:10.1006/jmbi.1995.0489
PMID:7674302
Abstract

The RuvC protein of Escherichia coli is an endonuclease that specifically recognises and cleaves Holliday junctions during genetic recombination. The structure of the RuvC-Holliday junctions complex has been investigated by DNAse I footprinting and by gel electrophoretic analysis. We find that RuvC binds to the Holliday junction to form a complex that exhibits 2-fold symmetry, and in which the three-dimensional structure of the Holliday junction is altered to an unfolded form. This structure is observed in the absence or presence of divalent metal ions and differs from either the unfolded square or the folded stacked X-structures that have been observed with protein-free Holliday junctions. KMnO4 was used to probe the junction DNA upon binding by RuvC, and indicates that base-pairing at the crossover is disrupted within the RuvC-Holliday junction.

摘要

大肠杆菌的RuvC蛋白是一种核酸内切酶,在基因重组过程中能特异性识别并切割霍利迪连接体。已通过DNA酶I足迹法和凝胶电泳分析对RuvC - 霍利迪连接体复合物的结构进行了研究。我们发现,RuvC与霍利迪连接体结合形成一个具有二重对称性的复合物,其中霍利迪连接体的三维结构转变为展开形式。无论有无二价金属离子,均可观察到这种结构,它不同于无蛋白霍利迪连接体所观察到的展开方形或折叠堆叠X形结构。利用高锰酸钾探测RuvC结合后的连接体DNA,结果表明在RuvC - 霍利迪连接体内,交叉处的碱基配对被破坏。

相似文献

1
Structural analysis of the RuvC-Holliday junction complex reveals an unfolded junction.RuvC-霍利迪连接体复合物的结构分析揭示了一个展开的连接体。
J Mol Biol. 1995 Sep 15;252(2):213-26. doi: 10.1006/jmbi.1995.0489.
2
Interactions between RuvA and RuvC at Holliday junctions: inhibition of junction cleavage and formation of a RuvA-RuvC-DNA complex.RuvA与RuvC在霍利迪连接体处的相互作用:连接体切割的抑制及RuvA-RuvC-DNA复合物的形成
J Mol Biol. 1996 Dec 20;264(5):878-90. doi: 10.1006/jmbi.1996.0684.
3
Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure.大肠杆菌RuvC蛋白是一种可解析霍利迪结构的核酸内切酶。
EMBO J. 1991 Dec;10(13):4381-9. doi: 10.1002/j.1460-2075.1991.tb05016.x.
4
Effect of DNA topology on Holliday junction resolution by Escherichia coli RuvC and bacteriophage T7 endonuclease I.DNA拓扑结构对大肠杆菌RuvC和噬菌体T7核酸内切酶I介导的霍利迪连接体拆分的影响。
J Mol Biol. 1997 Aug 1;270(5):663-73. doi: 10.1006/jmbi.1997.1157.
5
Identification of four acidic amino acids that constitute the catalytic center of the RuvC Holliday junction resolvase.鉴定构成RuvC Holliday连接体解离酶催化中心的四个酸性氨基酸。
Proc Natl Acad Sci U S A. 1995 Aug 1;92(16):7470-4. doi: 10.1073/pnas.92.16.7470.
6
Evidence that phenylalanine 69 in Escherichia coli RuvC resolvase forms a stacking interaction during binding and destabilization of a Holliday junction DNA substrate.
J Biol Chem. 2001 Mar 30;276(13):10432-6. doi: 10.1074/jbc.M010138200. Epub 2001 Jan 10.
7
Sequence-specificity of Holliday junction resolution: identification of RuvC mutants defective in metal binding and target site recognition.霍利迪连接体解离的序列特异性:金属结合和靶位点识别缺陷的RuvC突变体的鉴定。
J Mol Biol. 1998 Aug 7;281(1):17-29. doi: 10.1006/jmbi.1998.1934.
8
The RuvC protein dimer resolves Holliday junctions by a dual incision mechanism that involves base-specific contacts.RuvC蛋白二聚体通过一种涉及碱基特异性接触的双切口机制来拆分霍利迪连接体。
EMBO J. 1997 Mar 17;16(6):1464-72. doi: 10.1093/emboj/16.6.1464.
9
Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro.
Cell. 1994 Dec 2;79(5):853-64. doi: 10.1016/0092-8674(94)90074-4.
10
Parallel symmetric immobile DNA junctions as substrates for E. coli RuvC Holliday junction resolvase.平行对称固定DNA连接体作为大肠杆菌RuvC霍利迪连接体解离酶的底物
Biochemistry. 2002 Sep 10;41(36):10985-93. doi: 10.1021/bi020319r.

引用本文的文献

1
Prokaryotic DNA Crossroads: Holliday Junction Formation and Resolution.原核生物DNA交叉点:霍利迪连接体的形成与拆分
ACS Omega. 2024 Feb 27;9(11):12515-12538. doi: 10.1021/acsomega.3c09866. eCollection 2024 Mar 19.
2
Canonical and novel non-canonical activities of the Holliday junction resolvase Yen1.Yen1 解旋酶的规范和新颖的非规范活性。
Nucleic Acids Res. 2022 Jan 11;50(1):259-280. doi: 10.1093/nar/gkab1225.
3
Single-molecule insight into stalled replication fork rescue in Escherichia coli.单分子视角下的大肠杆菌复制叉停滞挽救。
Nucleic Acids Res. 2021 May 7;49(8):4220-4238. doi: 10.1093/nar/gkab142.
4
Single bacterial resolvases first exploit, then constrain intrinsic dynamics of the Holliday junction to direct recombination.单一的细菌 resolvases 首先利用,然后限制 Holliday junction 的固有动力学来指导重组。
Nucleic Acids Res. 2021 Mar 18;49(5):2803-2815. doi: 10.1093/nar/gkab096.
5
Junction resolving enzymes use multivalency to keep the Holliday junction dynamic.连接酶利用多价性使 Holliday 连接点保持动态。
Nat Chem Biol. 2019 Mar;15(3):269-275. doi: 10.1038/s41589-018-0209-y. Epub 2019 Jan 21.
6
Resolution of single and double Holliday junction recombination intermediates by GEN1.GEN1对单链和双链霍利迪连接体重组中间体的拆分
Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):443-450. doi: 10.1073/pnas.1619790114. Epub 2017 Jan 3.
7
Structure and Metal Binding Properties of a Poxvirus Resolvase.痘病毒解离酶的结构与金属结合特性
J Biol Chem. 2016 May 20;291(21):11094-104. doi: 10.1074/jbc.M115.709139. Epub 2016 Mar 24.
8
Human Holliday junction resolvase GEN1 uses a chromodomain for efficient DNA recognition and cleavage.人类霍利迪连接体解离酶GEN1利用一个染色质结构域进行高效的DNA识别和切割。
Elife. 2015 Dec 18;4:e12256. doi: 10.7554/eLife.12256.
9
GEN1 promotes Holliday junction resolution by a coordinated nick and counter-nick mechanism.GEN1通过一种协同的切口和反切口机制促进霍利迪连接体的解离。
Nucleic Acids Res. 2015 Dec 15;43(22):10882-92. doi: 10.1093/nar/gkv1207. Epub 2015 Nov 17.
10
GEN1 from a thermophilic fungus is functionally closely similar to non-eukaryotic junction-resolving enzymes.来自嗜热真菌的GEN1在功能上与非真核连接解析酶非常相似。
J Mol Biol. 2014 Dec 12;426(24):3946-3959. doi: 10.1016/j.jmb.2014.10.008. Epub 2014 Oct 12.