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菊池尾孢菌的电泳核型

Electrophoretic karyotype of Cercospora kikuchii.

作者信息

Hightower R C, Callahan T M, Upchurch R G

机构信息

Agricultural Research Service, North Carolina State University, Raleigh 27695-7615, USA.

出版信息

Curr Genet. 1995 Feb;27(3):290-2. doi: 10.1007/BF00326163.

DOI:10.1007/BF00326163
PMID:7736616
Abstract

Classical genetic analyses are not possible with the phytopathogenic fungus Cercospora kikuchii since no sexual stage has been identified. To facilitate gene mapping and to develop an understanding of the genome organization of C. kikuchii, an electrophoretic karyotype has been obtained using contour-clamped homogeneous electric field gel electrophoresis (CHEF). Eight chromosomes, two of which migrate as a doublet, have been separated into seven bands ranging from 2.0 to 5.5 Mb. Using this determination of chromosome number and size, the total genome size of C. kikuchii is estimated to be 28.4 Mb. In addition, genes encoding tubulin, ribosomal DNA, and four previously isolated light-enhanced cDNAs from C. kikuchii were assigned to chromosomes by Southern-hybridization analysis of CHEF blots.

摘要

由于尚未鉴定出致病真菌菊池尾孢菌的有性阶段,因此无法对其进行经典的遗传分析。为了便于基因定位并深入了解菊池尾孢菌的基因组组织,已使用轮廓夹恒定电场凝胶电泳(CHEF)获得了其电泳核型。八条染色体(其中两条以双峰形式迁移)已被分离为七条带,大小从2.0到5.5 Mb不等。根据这种对染色体数量和大小的测定,估计菊池尾孢菌的基因组总大小为28.4 Mb。此外,通过对CHEF印迹进行Southern杂交分析,将编码微管蛋白、核糖体DNA的基因以及先前从菊池尾孢菌中分离出的四个光增强cDNA定位到了染色体上。

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引用本文的文献

1
Chromosome-length polymorphism in fungi.真菌中的染色体长度多态性。
Microbiol Rev. 1995 Dec;59(4):686-98. doi: 10.1128/mr.59.4.686-698.1995.

本文引用的文献

1
Mutants of Cercospora kikuchii Altered in Cercosporin Synthesis and Pathogenicity.姜隔孢叶点霉中与姜炭疽菌合成和致病性改变相关的突变体。
Appl Environ Microbiol. 1991 Oct;57(10):2940-5. doi: 10.1128/aem.57.10.2940-2945.1991.
2
Genetic Transformation System for the Fungal Soybean Pathogen Cercospora kikuchii.真菌大豆病原菌黑痣病菌的遗传转化系统。
Appl Environ Microbiol. 1991 Oct;57(10):2935-9. doi: 10.1128/aem.57.10.2935-2939.1991.
3
Isolation of Light-Enhanced cDNAs of Cercospora kikuchii.分离增强光照条件下的梨叶点霉菌 cDNA。
Appl Environ Microbiol. 1991 Sep;57(9):2671-6. doi: 10.1128/aem.57.9.2671-2676.1991.
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Organization of the ribosomal ribonucleic acid genes in various wild-type strains and wild-collected strains of Neurospora.粗糙脉孢菌各种野生型菌株和野生采集菌株中核糖体核糖核酸基因的组织方式。
Mol Gen Genet. 1984;196(2):275-82. doi: 10.1007/BF00328060.
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Electrophoretic karyotyping without the need for generating protoplasts.
Curr Genet. 1990 Nov;18(4):385-6. doi: 10.1007/BF00318221.